| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0378 |
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| Symbol | |
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| ID | 4602146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 343292 |
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| End bp | 344185 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639773139 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_919790 |
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| Protein GI | 119719295 |
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| COG category | [K] Transcription |
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| COG ID | [COG1395] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.519248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA AAGTGGTTCG GTTTAAGTCC TCCGAGTACT GTGTTGACGA GGTTACGGTG
GCGTCTAAGT ACATCTTGCT TGAAAAGAGA GTGAAAGACG CTTACCAAGT TACACAGTAC
CTTGCGGAGA ATCTTCGAGT TTTTAGCGAG TTCTTAGAGG GGCTCCCCCT CATAATCGCC
GAGTCGTACA AGGGTGAGAA GATAGAGGAG GACGTAGTAT ACTCTAGGCA CAACGTCCCC
GTGGTTAGTA GCTCTACGGC AAATAGCCTC CTTAGAGGAG AAAGGAAGTA CTTAGTCTAC
GTTAGCAAAG GCGGAGTATT CGTGAAACTT AACGGTAAAG AACTTAGAAA GGCGCGGGAA
AGGATGGGGC TCTCGAGGGG GGCCCTTGCG AGAGAGGTTG GTGTCTCGGC GAGAACCATA
GCGTACTACG AGGAGGGACT CAGCGACGCG ACACTAGAGA TAGCCGCGAA GCTCGAAGAG
ATACTCGGCA GCGAGATCTT TGAAGCCATA AGCGTGGATT CGCTGAGGGA GCTGACGAAG
TCGGGTAGGC CTTCCGTTGG CAGCCCAGCC AAGAGGGGGA GAAACGTTGA GTGGCTTATC
TCCACGCTGA GGGACTTTGT AGGGGAAAGG TACTTTTTCG ATAAAGCACC CCTAGACGCT
GGGTTCAAAG TATCGCTGAA AACTACTTCA AAGTTTGCAA TCAAGGCCGG GATCTCAAAA
GAGGAGGAAG TTCAGGACGT GAAGGAGCTT TCCGAGGCGA CGGAGACCCC TGTAGTTATA
CTGAACAACA AGGAGGAGAT TTTGAGCGAG AAAGTGATTG TGGTTGATAA GAGGAGGCCT
GAGAAGCTTA GGGACTACCT GTCTAGGATA ATGGAGAACA CGCGTGACGA ATAA
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| Protein sequence | MTNKVVRFKS SEYCVDEVTV ASKYILLEKR VKDAYQVTQY LAENLRVFSE FLEGLPLIIA
ESYKGEKIEE DVVYSRHNVP VVSSSTANSL LRGERKYLVY VSKGGVFVKL NGKELRKARE
RMGLSRGALA REVGVSARTI AYYEEGLSDA TLEIAAKLEE ILGSEIFEAI SVDSLRELTK
SGRPSVGSPA KRGRNVEWLI STLRDFVGER YFFDKAPLDA GFKVSLKTTS KFAIKAGISK
EEEVQDVKEL SEATETPVVI LNNKEEILSE KVIVVDKRRP EKLRDYLSRI MENTRDE
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