Gene Tpen_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0373 
Symbol 
ID4600773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp338798 
End bp339754 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID639773134 
Producthypothetical protein 
Protein accessionYP_919785 
Protein GI119719290 
COG category[S] Function unknown 
COG ID[COG1340] Uncharacterized archaeal coiled-coil protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG AAACCGAATC CATCGAATCC CTAAGGCAAC AACTAATCGA GTATAGACAG 
AAGCTACAGG AGATAAGCGC AAAGATCCAG GAGGCTAGAT CTAAGAGGGA CTCTGCCAAC
GGCGAGGTCA AGCGGATCTC GGCCGAGATA CGGAGCCTGA GGGAGCAGTA CCAGGCTCTT
CGGCAACAGA TAGCGGCGGT AGCCGAGCAG AAGAAAACTC TTTACGAGAA GATTTCCAAG
CTTCGCGAGG AGAAGAAGGG CATCTTAGAG CAACTAAACA AGTTGCGCGA CGAGCTCAAA
CGCCTCAACG CCGAGTACAA CAATCTCCGG GGCTTCCTAG GTTCTAAGAG GTATGACGAG
GACGAGCTTC GAAACCGGAT AGAGCAGCTC GAGTGGCAGT ACCAGACGAT GACTCTACCG
CCGGAGGTAG AAAAGGTTCT TGTAAACAAG ATACGTAGCC TCGAGTCGAT ATACGTTAAT
GTAAAGCACT TAAACGAGGT AAGGGCTAAA ATTGAGGAAA TTAGAGCGCA AATACCCGAG
TTGAAGAAAA AGGTTCAGGC CATAAACGAG GAACTGAAGA CTGTAGTCTC GGAGTACCTT
AAAGTTAAGG AGCAGATGCA GGCTTTAAAG CAACAGAGAG ACGAGCTCGT TAAAAGACTC
GTTGAGCTCA AGCAGGAACG CGACAGGATA AGGGAGACTG CGAACAACTA TCACCAGATC
TACATCTCGC TCCTCTCCGA GGAAAAGTCG CTCAGGGAGG AGCTTGAGAG AATCTCGATA
CTGCTGAAGG CAAAGGAGTT GTCGCAGCAC CTGGAAGAGC GTAAGAGGCA ACTCTACGGC
AAAGCCATGG AGGCCTACGA GAGATTCCGC AGAGGAGACC CCGTAACCCT CGACGAGTGG
AAGCTACTAG TCGAGTTTAA CCTGATAAAC TTGAAGTCCG GAGAGCAGCA GTCCTAG
 
Protein sequence
MAAETESIES LRQQLIEYRQ KLQEISAKIQ EARSKRDSAN GEVKRISAEI RSLREQYQAL 
RQQIAAVAEQ KKTLYEKISK LREEKKGILE QLNKLRDELK RLNAEYNNLR GFLGSKRYDE
DELRNRIEQL EWQYQTMTLP PEVEKVLVNK IRSLESIYVN VKHLNEVRAK IEEIRAQIPE
LKKKVQAINE ELKTVVSEYL KVKEQMQALK QQRDELVKRL VELKQERDRI RETANNYHQI
YISLLSEEKS LREELERISI LLKAKELSQH LEERKRQLYG KAMEAYERFR RGDPVTLDEW
KLLVEFNLIN LKSGEQQS