| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0371 |
|---|
| Symbol | |
|---|
| ID | 4600771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 337264 |
|---|
| End bp | 338052 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639773132 |
|---|
| Product | GTPase |
|---|
| Protein accession | YP_919783 |
|---|
| Protein GI | 119719288 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGT ACTTGGTCGT CTTTATAGTG GGACCAGCTG GCTCCGGAAA GAGTACATTC
ACTTCGAGCT TCAAGGACTG GCTACTTTCA CAGAGTACCC CCGCTTCAAC AATCAACCTC
GACCCCGCCG TGGAATACTT AGACTATGAC CCCGACATCG ACATAAGGGA GTACGTATTC
GTGAGGGATG TAATAGAGAA GTATAACTTG GGACCTAATG GGGCGATAAT AGCCTCTGTC
GACTTGGCTG TTGAACATTT AGACAAGGTG CAGGCCGCCA TGGAAGACCT ACCCGAAGGC
TACGTCCTCG TAGACACGCC GGGCCAGATG GAGATTTTCG CTTACAGGCA GAGCGGTACT
TACATTGTCA GCGAACTATG CTCGTCCAGC TCCCTCTGCG CTGCGGTGTT CATGGTGGAC
GCCAGCATAG CCACTCAACC CTACAACTTC CTATCCCAGC TATTCCTCTC GGCGTCGATG
TACTATAGGC TGAGGCTACC GCTGACAGTC GCAGTCAATA AGATCGACGT GCTTGAAGAC
ATGGAGAAAA ACAGGCTGCT AAACTGGTTG TCCGATGTGG AGTCTATGGA AAACGAGCTC
GAGTTCGCGA GCAACGTAGA CAGAGTCTTC ACGAAGAGAG TTTTACGACT CTTATCGGAC
TTCATGGAAG TAGTCCCGTT CGTACCCGTC TCTGCGAAAA CCAAGGAAAA CTTCGAGCAA
GTGTACTTCT ACTTGCAACA GATCTATAGA GGGGGAGAGG ACTTCGAGAG AGACGCAAGT
GAATTATAG
|
|---|
| Protein sequence | MVKYLVVFIV GPAGSGKSTF TSSFKDWLLS QSTPASTINL DPAVEYLDYD PDIDIREYVF
VRDVIEKYNL GPNGAIIASV DLAVEHLDKV QAAMEDLPEG YVLVDTPGQM EIFAYRQSGT
YIVSELCSSS SLCAAVFMVD ASIATQPYNF LSQLFLSASM YYRLRLPLTV AVNKIDVLED
MEKNRLLNWL SDVESMENEL EFASNVDRVF TKRVLRLLSD FMEVVPFVPV SAKTKENFEQ
VYFYLQQIYR GGEDFERDAS EL
|
|---|
| |