Gene Tpen_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0352 
Symbol 
ID4600890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp322625 
End bp322957 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content46% 
IMG OID639773113 
ProductRNA polymerase Rpb4 
Protein accessionYP_919764 
Protein GI119719269 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGCGAG TGATTTCCGA GAAAAACTTG ACCTACGCAG AGGCGTTAGA AATACTGTTG 
AAAGAGGAGT CTTCTAGAGA GCTTACCAGC ATAGAAAGGT ACACCCTGGA GTACCTAAGA
AAGTTCTCGA AAGTTCGCGA TGCGCAAACA GCGAGAAGCC TCGTAGAGAG GCTCATGAAG
GAGTTTGACA TACCGGAAGA CGTCGCAGTT CAAATAGTAA ACGTGAAGCC CGCAGACCCT
CAGGAGGCCA AGATTTTTGT TTCGCATTTG AACAAAGTGT TTACGGATAA AGACTTTGCG
AGGATAATAG AGATTCTCTC GTCCTCAGAG TAG
 
Protein sequence
MPRVISEKNL TYAEALEILL KEESSRELTS IERYTLEYLR KFSKVRDAQT ARSLVERLMK 
EFDIPEDVAV QIVNVKPADP QEAKIFVSHL NKVFTDKDFA RIIEILSSSE