Gene Tpen_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0327 
Symbol 
ID4600978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp294340 
End bp295011 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID639773087 
Productribose 5-phosphate isomerase 
Protein accessionYP_919739 
Protein GI119719244 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTAA ACGCCGCTAG GGAAGCTGCG CGCCACGTTC GTGACGGCAT GGTCGTGGGG 
CTTGGGAGTG GGACTACAGT GAAGATCTTC ATAGACGTAC TCGCCGAGAG GGTAAGGCAG 
GAAAACCTTA CAATTTTCTT TGTATCCTCA TCCATCGATA CAAGCCTCTA CGCTGCCGGG 
AAAGGTCTAC TCGAAGTACC GCTACACGAG TACACCCCAG AGGTAAGCTT CGACGGCGCC 
GACACCGTGC TACCGGATAG GTCCCTGATC AAGGGGGGAG GAGGGTGTCT TCTTAGAGAA 
AAGATCGTGG ACTACTACTC CAAGGAGTAT GTAGTAATTG TGGATGCGAC AAAGGTCGCG 
GAGACCCCAA GGAACCTTAA CGTTCCCGTA GAGGTCCATC CTCAGGCTTT CAAGAAGGTT 
ATGGAGGAGT TAAGGAAGAG TTACGGCGCG GTGAACGTTA CGCTTAGAAC CTACGAAAAA 
GGGAAGCTAG GACCGGTGCT AACCGATAAC GGGAACTTTA TCCTCGATGC GCTTTTCGAC 
GAACTTAAAG ACCCGTTAAG GCTCGAGCTT TCCTTAAAGA GCGTCCCTGG ACTAATAGAG 
ACGGGAATAT TCTCCGTCAA AAAACCATCA AAGATCATAG TGGGGTACCT GCACGGTGTG 
CAAGTGATAT GA
 
Protein sequence
MKLNAAREAA RHVRDGMVVG LGSGTTVKIF IDVLAERVRQ ENLTIFFVSS SIDTSLYAAG 
KGLLEVPLHE YTPEVSFDGA DTVLPDRSLI KGGGGCLLRE KIVDYYSKEY VVIVDATKVA 
ETPRNLNVPV EVHPQAFKKV MEELRKSYGA VNVTLRTYEK GKLGPVLTDN GNFILDALFD 
ELKDPLRLEL SLKSVPGLIE TGIFSVKKPS KIIVGYLHGV QVI