| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0316 |
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| Symbol | |
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| ID | 4602084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 279985 |
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| End bp | 281193 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639773076 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_919728 |
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| Protein GI | 119719233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGACAG TGGACGTTGT ACAGTCATTG GTAGAACTTG TGAAGATTCC CTCCGAGGTT
TACTACGAAG GAAACCGGAT AGTAAGGAGG TACTACCGGG AAGCTGCTGA AGCCGTTGCG
CGCCTAGCCG AAACTCATGG CTTGAGGGTT GAAAAAGTGG ATCTCGAGGG AGGCGAGATC
CCTACAGTTA TTGCGTCGCT TCCAGGTAAG GCATCCGGCA AACCATCGGT CGCGTTCGTT
ACGCACTACG ACGTTGTACC AGCAAAGGGT CCTTGGGTAG TTGAAGGAAG GACTATGGAC
CCCTACTCCC CCCTGGTTCT AGACGGGAAG GTCTACGGAA GGGGGGCTGC AGACGACAAG
TCGGGGATAG TCGCGACGAT CGCCGGGCTT GTAGACATCA GGGAGGCGGG CATTGAGCCG
AGATACAACC CCGTGGTCGT GGTCACAGGG GACGAGGAAG TGGGGGGAAC GGGTATTAGG
CGGCTTCTCG AGAAGGGCTA CCGGTGGGAC TACGTGATCA TAGTGGATAG CGGGTCAGAG
TACGTTTCGG TAGGCGCGAG CGGCGTTGTG CACGGGTGGA TAAAGGTCAA GGGGAAATCG
GGGCACGCCG GCTACCCCCA CGTTGCTAGG AACGCCGTCG AGGACCTCGT GAGGGTTCTG
GGCGAGCTTA TGGAGCTCAA GACTGTGCGA GGAGCAAGGC TCTCGAAGTA TCCGTCGCCT
CCCGGGAGCC CGGTGCCCTA CGTATGGGGA AGACTTACTT TCAATATACT AAGGTTGCCT
CCCACGGAGC CTGAAAAACA CAACAGGATT CCCGGCGAGG CGTGGTGCGG GTTCGACATG
AGGCTCCTAC CGGAGGAGGA CGTCGAGGAA GCTGTGAGAG AGCTTTACGC CAAGCTCTCG
TCCATCGCGA TGAAGCTTGG AGTGTCCTTG GAGGTAGAGA TAATAGGGAA GCAGAAAGGC
TGGTATTCGA AGAACGAGGC GTTCGTTCGG GAGGTGCTAA CGGCTGCTGG GAGAAGCAAG
GGCCGCGAGG TTCCGGTAGC GGCGGAGCTT GGCGGTAACG ATGGAACGTT TTTCGACGAG
TATGGAATGG ACGTCGTAGC TTTTGGCACT ATACGCGAAG GTACAAACAT ACACTCGGAG
GGGGAGCACG TATACGTAGA AGACATCGAG GCATTCCGAA AGTTCATGTA CGAGTTCCTC
AAACCTTAG
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| Protein sequence | MMTVDVVQSL VELVKIPSEV YYEGNRIVRR YYREAAEAVA RLAETHGLRV EKVDLEGGEI
PTVIASLPGK ASGKPSVAFV THYDVVPAKG PWVVEGRTMD PYSPLVLDGK VYGRGAADDK
SGIVATIAGL VDIREAGIEP RYNPVVVVTG DEEVGGTGIR RLLEKGYRWD YVIIVDSGSE
YVSVGASGVV HGWIKVKGKS GHAGYPHVAR NAVEDLVRVL GELMELKTVR GARLSKYPSP
PGSPVPYVWG RLTFNILRLP PTEPEKHNRI PGEAWCGFDM RLLPEEDVEE AVRELYAKLS
SIAMKLGVSL EVEIIGKQKG WYSKNEAFVR EVLTAAGRSK GREVPVAAEL GGNDGTFFDE
YGMDVVAFGT IREGTNIHSE GEHVYVEDIE AFRKFMYEFL KP
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