| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0311 |
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| Symbol | |
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| ID | 4602079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 277524 |
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| End bp | 278105 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773071 |
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| Product | tRNA intron endonuclease domain-containing protein |
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| Protein accession | YP_919723 |
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| Protein GI | 119719228 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAAGG GTCAGGAGGT CGCGAAGATT AGCGGGGAGG GGGTGTTCGA CGGGAGGATC
GTCAGGGTGC TCGACAAAGA GTTCGCGGAG CAACTGTACC AGCGTGGCTA CGGTATGCTA
AGCGGGGAGA TCTTAGAGCT TACACTAGTA GAGGCAGCGT ACCTCGTTTA CCGCGAGATG
TTGAAGGTTA AAGACGACCA AGGAAGGACT TTATCGTTTC CAGAGATCGT TAGGCTGGCG
TCGAATTTTG ACCCGGACTT CTGGGTTAAG CTGAACGTCT ACACGGATTT GAGAAACAGG
GCTCTCCCAG CGAAGCCGGG AGTAAACCCC TACGAGTTCC TGGTGGATTG GAAGAAGAAG
GGGAAGCCGA GGAGGCTCCT AGTGAGGATC CTTAGGGAGG GGACTCGTGT GAGCTTCCCG
GAGTTCGAGG ACATGTTTCG CAGGGCTTTA GAGAGCGATA GGGAGTTGGT GATCGCCATT
GTAGATAAGG AGGGTGTGGT TACCTATTAC ACGGTGGAGG GTGGTAGCTA CGAGCAAGTC
GGGGCAAGCG TTGAAGATAA CTTCGAGGTA CCTTCTGAGT AA
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| Protein sequence | MEKGQEVAKI SGEGVFDGRI VRVLDKEFAE QLYQRGYGML SGEILELTLV EAAYLVYREM
LKVKDDQGRT LSFPEIVRLA SNFDPDFWVK LNVYTDLRNR ALPAKPGVNP YEFLVDWKKK
GKPRRLLVRI LREGTRVSFP EFEDMFRRAL ESDRELVIAI VDKEGVVTYY TVEGGSYEQV
GASVEDNFEV PSE
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