| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0302 |
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| Symbol | |
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| ID | 4601125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 268962 |
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| End bp | 270002 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639773063 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_919715 |
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| Protein GI | 119719220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGGTTG ACATAAAGGA GCTTGTAGAG CCGGTAGCAA AGGAGGTGGA GCTGGGGTTC
TTCTCGAAAA AAGTGATAGC CATAGATGCC TACAACTCGC TGTACCAGTT CTTGGCTACT
ATAAGGCAGA AGGACGGAAC GCCGTTACTT GACGCGCAAG GAAACGTAAC AAGCCATCTC
AACGGACTAT TCTATAGGAC GATAAACTAC ATAGAGTTAG GGATAAAGCC TGTGTACGTC
TTCGACGGGA GGCCGCCGGA GTTGAAGCAG AAGGAACTGG AGAGGAGGTA CCAGATAAAA
GTAGAAGCCG AGAAAAAATA CCGAGAAGCT ATAGAGAGGG GAGACCTCGA GGAAGCCCGT
ATCTACGCTC AGCAGACTAG CAGGCTAACG GCAGCCATGG TTCATGACGC GAAGCTCCTT
CTGCGCTACA TGGGCGTCCC CTACGTGGAG GCTCCGAGCG AGGGAGAAGC GCAGGCCGCT
TACATGGTGA AGAAAGGCGA CGCCTGGGCC TCGGGAAGCC AGGACTTCGA CTCGCTACTA
TTCGGAAGCC CCAGGCTCGT TAGGAATTTA GCCATAACTG GTAAGCGTAA ACTACCGCGG
AAAGACGTCT ACGTCGAAGT AAAGCCCGAG ATTGTCGAGC TCGAAGAACT ACTTAGGGTA
CACGGCATAA CACACCAGCA ACTCGTAGTT ATAGGTATTC TCGTAGGGAC GGACTATGCG
CCAGAGGGAG CTAGGGGTAT TGGGGTGAAA AAGGCTTTGA AGCTAGTGAA GGAGCTGAAG
GACCCCGAGA AAATTTTCAG ATCGGTGGAG TGGTCGAGCG ACGTGCCACC CGAGAAGATC
CTAGAGCTAT TCCTGCACCC AGAAGTCACG GATAGCTACG AGCTTACCTG GAAAGAGCCC
GACAAGGAGA AAGTAATCGA ACTACTGGTC GAAAGACATC AATTCTCGAT GGAACGCGTA
ACGAACGCCT TGGATAGATT AGAAAAGGCA GTCAAAACCC ACTTTAAGCA ACAATCTTTG
GAGTCCTGGT TCGGCTTCTA G
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| Protein sequence | MGVDIKELVE PVAKEVELGF FSKKVIAIDA YNSLYQFLAT IRQKDGTPLL DAQGNVTSHL
NGLFYRTINY IELGIKPVYV FDGRPPELKQ KELERRYQIK VEAEKKYREA IERGDLEEAR
IYAQQTSRLT AAMVHDAKLL LRYMGVPYVE APSEGEAQAA YMVKKGDAWA SGSQDFDSLL
FGSPRLVRNL AITGKRKLPR KDVYVEVKPE IVELEELLRV HGITHQQLVV IGILVGTDYA
PEGARGIGVK KALKLVKELK DPEKIFRSVE WSSDVPPEKI LELFLHPEVT DSYELTWKEP
DKEKVIELLV ERHQFSMERV TNALDRLEKA VKTHFKQQSL ESWFGF
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