| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0282 |
|---|
| Symbol | |
|---|
| ID | 4602092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 247287 |
|---|
| End bp | 247736 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639773038 |
|---|
| Product | NusA family protein |
|---|
| Protein accession | YP_919695 |
|---|
| Protein GI | 119719200 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01952] NusA family KH domain protein, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.956097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGG AGGAGGGTCG AAGACTGACG CATGAAGACC TCCAGATAAT GAATTTGTTC
GAGGAGATAA CGAAGGTGCC GCCTAAAGAC ATAGTCTACG ACGATACCTT CCAAAGGTAC
ATATTCCTGG TGGACAAGGG TTTTGCCCCC CTCGCGGTTG GGAAGAACGG GTCAAAGATA
CGGATGATTA AAGAACTGCT TAGAAAAGAC GTGGAAGTAG TTGAGGACGG GTCATCCCTC
GAAGATTTCG TCAAATCGGT GTTCTTCCCC GCCAGGGTCG TCGAAGTTAA AGTCCGAGAA
GAGAATAACA GGAAAGTTGT CATAGCCGTG GTTCCCCCGG ATCAGCTCGG GCTCGCGATA
GGCAGGAACG GCAGGAACGT TCAGCGGGCG AAAATCCTGC TGAAAAGATA CTATGGGGCG
GACGAGGTAA GAGTGCAGAG ACAAGGGTAA
|
|---|
| Protein sequence | MTSEEGRRLT HEDLQIMNLF EEITKVPPKD IVYDDTFQRY IFLVDKGFAP LAVGKNGSKI
RMIKELLRKD VEVVEDGSSL EDFVKSVFFP ARVVEVKVRE ENNRKVVIAV VPPDQLGLAI
GRNGRNVQRA KILLKRYYGA DEVRVQRQG
|
|---|
| |