| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0267 |
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| Symbol | rfc |
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| ID | 4601685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 235688 |
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| End bp | 236665 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773022 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_919680 |
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| Protein GI | 119719185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGG AGTTATGGGT TGAGAAGTAC AGGCCTAGGA GCCTCGACGA GATAGTGGAC
CAGGAAGAGA TCGTGAAGAG GCTTAAAGAG TTCGTGAAGA ACAAGAACAT GCCGCATCTC
CTTTTCGCGG GACCTCCCGG GACTGGGAAA ACTACTGCGG CTCTCGCTCT AGCGCACGAC
CTGTACGGCG AAAGTTGGCG TGACAATACT CTGGAGCTAA ACGCCAGCGA TGAGAGAGGC
ATCGACGTTA TCAGGAGCAG GATAAAGGAC TACGCAAGGA CGTTGCCTAT AGGCGACGTG
CCGTTCAAGC TGGTTATACT GGACGAGGCA GACAACATGA CTGGCGACGC ACAACAAGCT
CTGAGGAGGA CCATGGAGCT TTTCTCGAGG AACACTCGCT TTATCCTGAT AGCTAACTAT
GCCTCCAAGA TAATAGAGCC GATACAGTCT AGATGCGCGG TGTTCAGGTT CCAGCCTCTA
CCGAAGGGGG ACGCGTTCCA GAGGTTGAGG TGGATAGCCC AGCAAGAGGG GATAACGGTT
GACGACGGGG CTCTCGAAGC AATATGGGAG GAGAGTCAGG GCGACCTTAG GAAAGCTATA
AACACCTTGC AGGCAGCCTC CGCTATCAGC AGGAACGTAA CAGAGGAGGT CGTATACGCG
GCACTCGGCC GCGTGAAGCC CAAAGAAGTA AGAGAGATGA TTGAAAGCGC ATTGAAGGGT
AACCTGTTGG AGGCTAGGGA CAAGCTTAGG CTTCTGCTCT ACAACTACGG CTTGTCCGGC
GTCGACATAA TACGCTTTAT CCACAGGGAG GTGCTCTCAC AGAAGAGCGT TAGGCTCGAC
GATGCTACCT TGGCAGAGCT ACTTGTACTG GTCGGAGAAA CAAACTACAG GATAGTGGAA
GGGTCCGACG ATGAAATACA GTTAATGGCG TTGCTCTCGA AGCTTGCACT GGTCTCGAAG
AAAGCTGCTA AGGGTTAG
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| Protein sequence | MSEELWVEKY RPRSLDEIVD QEEIVKRLKE FVKNKNMPHL LFAGPPGTGK TTAALALAHD
LYGESWRDNT LELNASDERG IDVIRSRIKD YARTLPIGDV PFKLVILDEA DNMTGDAQQA
LRRTMELFSR NTRFILIANY ASKIIEPIQS RCAVFRFQPL PKGDAFQRLR WIAQQEGITV
DDGALEAIWE ESQGDLRKAI NTLQAASAIS RNVTEEVVYA ALGRVKPKEV REMIESALKG
NLLEARDKLR LLLYNYGLSG VDIIRFIHRE VLSQKSVRLD DATLAELLVL VGETNYRIVE
GSDDEIQLMA LLSKLALVSK KAAKG
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