| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0266 |
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| Symbol | |
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| ID | 4601684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 234440 |
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| End bp | 235681 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773021 |
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| Product | replication factor C large subunit |
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| Protein accession | YP_919679 |
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| Protein GI | 119719184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG TAAAAGTTCA GCTAGTCCCT TGGACCGAGA AGTATAGGCC CGCCAGAATT
GCCGACGTAG TGGGAAACGA GGAGGCAAAA AAGAAGTACG TGGCTTGGAT AAACTCCTGG
GTCAAGGGGA AACCCAGCAA GAAGGCCGCT CTGCTCTACG GGCCTCCCGG GAGCGGTAAG
ACAAGCATAG TACACGCAAC GGCCAAGGAG TTCTCGTGGG AGTTGATAGA GCTGAACGCT
AGCGACGTGA GGACGCGCGA AGCCTTGCAA CAGAGGCTCC TAGGAGCGCT GAACACCCGA
TCCGTGCTCG GCTACTCCGG GAAGATAATA CTTCTAGACG AGGTTGACGG GATATCGACC
AAGGAGGACG CTGGAGGGCT CCAGGCGATT GTAGAGCTTA TAGAGAAATC CAACTGGCCC
ATAGTTCTAA CGGCCAACGA CCCATGGGAT CCAAAGCTTA GACCTCTAAG AGACCTCTGC
GAGCTCATCG AGTTCAAGAA GATAGGCAAG AGGGACATAA TGAAGGTCTT GGAGAACATC
TGCTCAAAGG AGGGTGTCGA GTGCTCAAGG GAGGTTCTAT CCGCTATCGC GGATAACGCT
AAGGGAGACC TGAGGGCAGC GATAAACGAC CTGCAGTCTC TCGCCATGGG GAAGAAGACT
ATAAGCCTCG CCGACCTCCA GATCCTAGGG GACAGGGCTG AGCAGGAAAC CATATTCGAC
ATCGTGAGAA GCGTTTTAAC GGCTAAGTAC CCCGAGCAGG CCCTAGCTGT CACCAGGTTG
CCGTCGCTCG ACTACGAAAT GCTTATGCAG TGGCTAAGCG AGAACATCGT GTACCAGTAC
GAACCCAGCT TGCAGGCGAT AGCCGACGCA TACGACGCTC TCTCATGGGC TGACATAATG
TTGACCAGGA TGAAGAGGGA GCAGCAGTGG GCGTTGCTCT CCTACGCGTT GGAGCTTATG
ACTGCCGGCG TGGCAAGCGC GCGGGAGCGT CCACCCTTCA AGTTCGTGAA GTATTCTTTT
CCGGAGAAGC TAAGGATACT TGCGCGATCG AAGGAAAAGA GGGAGAAGTT CGTACGCGCC
GTTAGAGGTG CAGCGGCGAA GATTCACGTC TCTACGTCTA AGTTCAGAAC GGACGTTCTC
CCGTATCTCA GGGTTATCTA CGAGCACGAC AAGAAGAGGG CATTAGAGAT ACTGCGGAAT
CTCGGCGTCC CAGAGGACGC CTTAGAGCTC GCTACTCAGT AA
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| Protein sequence | MSAVKVQLVP WTEKYRPARI ADVVGNEEAK KKYVAWINSW VKGKPSKKAA LLYGPPGSGK
TSIVHATAKE FSWELIELNA SDVRTREALQ QRLLGALNTR SVLGYSGKII LLDEVDGIST
KEDAGGLQAI VELIEKSNWP IVLTANDPWD PKLRPLRDLC ELIEFKKIGK RDIMKVLENI
CSKEGVECSR EVLSAIADNA KGDLRAAIND LQSLAMGKKT ISLADLQILG DRAEQETIFD
IVRSVLTAKY PEQALAVTRL PSLDYEMLMQ WLSENIVYQY EPSLQAIADA YDALSWADIM
LTRMKREQQW ALLSYALELM TAGVASARER PPFKFVKYSF PEKLRILARS KEKREKFVRA
VRGAAAKIHV STSKFRTDVL PYLRVIYEHD KKRALEILRN LGVPEDALEL ATQ
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