| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0233 |
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| Symbol | |
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| ID | 4600703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 209029 |
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| End bp | 210459 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639772987 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_919646 |
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| Protein GI | 119719151 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.745222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGCTTA AAGAATCTTT AGACAGCGTT TTTAGATTTC TCCCGGAGAT AGAAAAGCCA
CGGAGAAAGC CGCCTCTCAG CGAAAGGTTG CTCTGGACGG CCCTGGTGCT AGTCGCCTAC
TTCGTAATGG GTCAGACACC GCTGTACGGT ATTCCGAGGC AGACCCAAGG CACTCTAGGC
GCCCTCGAGT TTCTAAGAGT CGTCATGGCG TCCAAGAGGG GGACTCTCAT TGAGCTTGGT
ATAGGTCCAA TAGTGACTTC CGGAATAGTC TGGGAGCTAC TGGTCGGTAG CAGGATAGTA
AACCTTGACC TCACGACACC GGAAGGCAGG AGGACTTTCG CAGGTCTACA GAAACTCACG
GCTTTCCTCT TCGCAGCGTT AGAGGCGGCA GCCTACATAC TCGGGGGCGT TTACGGAGCC
CTAACACAGC AACAACAGAT CATAGTCTTC GTGCAGCTAT TCGTTGCGAG CACGTTCGTT
ATACTCATGA ACGACATGCT CGAAAAGGGC TGGGGCATAG GGAGCGCTGT CTCGCTATTC
ATAGCGGCAG GTGTCGCTCA ACAGATCTTC TGGGAACTCT TCAGCCCGAT AGGACCCCTA
GGGGACGGGC TCTACTACGG GCTCTTCCCG TCGCTCTTCT CCGCGCTGGT CAGCGGTAAC
TCAACGCTAC TGATGCATGT CGTAGTTCGA CCGAGCGGGT ACCCCGACCT TGTAGGCTTC
GTGGGAATGG TTGTTATGTT ACTGCTACTA ACGTACATGG AGTCGATGAA GATCACGATA
CCAGTTTCTA GCGTTAGGTT TGGCGGGGCG AAAACGAGGA TACCGTTGAA GTTCCTCTAC
GTATCGGTCA TGCCGGTAAT CCTCGTAGGC GCTCTCTATG CCAACGTGGT GATGTTCACG
CAGGCGCTGT GGCCCAGGGT GAATCCGGGC AACCAGAACC CCTGGCTCAA CGTTATCGCA
AAGTACAACT ACACGGAGTA CGGCCCGGTG CCTCTACCTG GGTCGTTCGT GTACTACATA
TCTCCTCCGC GCTCACTTGC GTCCGCCCTC GCCGATCCCG TCCACCTAGT GGTGTACTCT
CTGCTCTACA TCGGGTTCGC CGTCCTCTTC GGAGTAGCCT GGATCCTAAC AAGCGGCATG
GATCCCGAAA CGCAGGCGGA GCAGCTCGCA AAGGCTCAGC TACAGATACC CGGCTTTAGG
AAAAGCGAGA AAGTCATAGC ATCCATGTTG AAGCGCTACA TCTGGGGGTT AACGATACTG
AGTAGCATAA TAATAGGCGT CATCGCTGTA GTCAGCGATA TATTCAGAGT AATGGGTGGC
GGCACGGGCA TACTACTGTT GGTAGGCATA ATAGTGCAGT ACTACTCCAT ACTGGCGAGC
GAGAGGGCAC TCGAAATGTA CCCATCGCTC GCGAGGCTCA TTGGAGAGTA A
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| Protein sequence | MGLKESLDSV FRFLPEIEKP RRKPPLSERL LWTALVLVAY FVMGQTPLYG IPRQTQGTLG
ALEFLRVVMA SKRGTLIELG IGPIVTSGIV WELLVGSRIV NLDLTTPEGR RTFAGLQKLT
AFLFAALEAA AYILGGVYGA LTQQQQIIVF VQLFVASTFV ILMNDMLEKG WGIGSAVSLF
IAAGVAQQIF WELFSPIGPL GDGLYYGLFP SLFSALVSGN STLLMHVVVR PSGYPDLVGF
VGMVVMLLLL TYMESMKITI PVSSVRFGGA KTRIPLKFLY VSVMPVILVG ALYANVVMFT
QALWPRVNPG NQNPWLNVIA KYNYTEYGPV PLPGSFVYYI SPPRSLASAL ADPVHLVVYS
LLYIGFAVLF GVAWILTSGM DPETQAEQLA KAQLQIPGFR KSEKVIASML KRYIWGLTIL
SSIIIGVIAV VSDIFRVMGG GTGILLLVGI IVQYYSILAS ERALEMYPSL ARLIGE
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