Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0222 |
Symbol | rplP0 |
ID | 4601212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 200802 |
End bp | 201686 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639772976 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_919635 |
Protein GI | 119719140 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.515044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTAC AGGCAGTTAG CGTTAAGAGT AGCCCCGCAC GAGCAAGGAA GGCTAAACTC CTCGAAGAGC TTTCAGGGTA CCTAAAGCAG TACCGCTACT ACATGGTAGC TTCTATCACG GGGTTGCCAG CATCCGTGGT GAAGACCTCG AGGAGCCTAC TAAGAAGTGA CGGATCCCTG ATGAAGGTCG TGAAGAACAC TATATTCCTG CTGGCACTCA AGAACACCGG GAAGTACGTC GAAGGCATAG AGGAGCATCT CCGCGGCCAG AACGCCGTAA TCTTCACGAA CAAGAACCCC TTCGAGATAC TCTTCTTTCT GGACAAGCAG AAAATCATGC GGGAGGCAAG GGCGGGGGAC ATCGCGACCA GCGAGATAGT GTTGCCAGCC GGTAACACGG GCATACCCCC TGGACCCATG ATTAGCAATT TCAACAAACT AGGCATACCC ACGAGGGTCC AGGAAGGTAG CATATGGATA GCGAAGGACA CCGTCGTAGC TAAGCCTGGG GACGTAATAT CCCCAGAGCT GGCCGAACTT CTCTCGAAGC TAGGTCTAAA GCCCATCGAG AGCAAGTTAC AGATAAAAAC CATCTACCTC GATGGCAAAG TGGTATCCCC AAAGGACGTG GAGCTAGACG TAAGCCTCTG GAAGAACAGG CTGGTCTCCG CGCATACAGA AGCGTACAAC TTAGCGTTCA ACGCAGCTTT GCCACTACCG CAAGTGCTAC CGCAGCTCAT CGCCAAGGCT CACATTGAGG CGCTAGCGCT CGCGTCTAAC GCGGCTTACC CGGCTAGAGA AGCGTTACCG CAGATCCTAG CCAAAGCAGA GGCTCAGGCC AAGGCCCTCT ACGAGAGGCT TAAAGCCGTA AAACCCGAGC TTTAG
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Protein sequence | MSLQAVSVKS SPARARKAKL LEELSGYLKQ YRYYMVASIT GLPASVVKTS RSLLRSDGSL MKVVKNTIFL LALKNTGKYV EGIEEHLRGQ NAVIFTNKNP FEILFFLDKQ KIMREARAGD IATSEIVLPA GNTGIPPGPM ISNFNKLGIP TRVQEGSIWI AKDTVVAKPG DVISPELAEL LSKLGLKPIE SKLQIKTIYL DGKVVSPKDV ELDVSLWKNR LVSAHTEAYN LAFNAALPLP QVLPQLIAKA HIEALALASN AAYPAREALP QILAKAEAQA KALYERLKAV KPEL
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