| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0221 |
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| Symbol | alaS |
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| ID | 4601814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 198025 |
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| End bp | 200748 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639772975 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_919634 |
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| Protein GI | 119719139 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGG AGGATTTCGT AAACTTGCCG TTCTTCGTTG AGAATGGATG GATAAAGAGA
ACCTGCCCGG TGTGCGGCAG AACTTTCTGG ACGCTTGACC CAGAGAGGAA GGTCTGCGGC
GATCAACCCT GCGAGGAGTA CTCATTCATA GGGAGGAGCG TCGGCGTAAA GCCGGAATCC
CTGAGTGCAA CCAGAAAGAT GTTCATCGAC TTTTTTGAGA AGAGGAACCA TACACCCGTG
AAGCGCTACC CCGTAGTCGC CAGATGGAGG GAAGACGTGT ACCTCGTGGG GGCCTCCATC
TATGACTTCC AGCCATGGGT CACCGAGGGG CTTGTACCTC CACCGGCCAA CCCCTTGGTC
ATCTCCCAGC CCAGCATAAG GCTCACCGAC CTCGACAACG TGGGTAAGAC CGGGCGGCAC
CTGACAGGCT TCGAGATGAT GGCCCACCAC GCCTTCAACA TACGCGATCA GCGGGTCTAC
TGGGCTAACG AGACCGTGGA GTATGCCTTC GAAGTCCTAA CGAAGGTTTA CGGAGTGAAA
CCGGAGGAGA TAACCTTCAT CTTCGACATG TGGAGCGGTG GCGGGAACGC TGGGGAAGAC
TACGAGGTCA TCGTGAGGGG GCTTGAAGTA GCCACGCTCG TGTTCATGCA CTACAAGACC
GCCGAGGACG GTAGCCTGAT ACCGATAGAG AACAGGATAG TGGATACCGG GTACGGCCTG
GAGAGAATAT ACTGGTTGCT AACTGGTCAC TACAACGTAT ACGAGGCTGT GTTTTCCGGG
GTGATAGACA GGCTAAGGAA GCTCAGCGGC GTGGAGAAGC CTCCAGACGA CCTGATGTAC
AGGCTAGCCT TGAAGAGCGG GAGGCTGGAC TTCAAGAAGC CGCTCGAGGC CTTGGAGACA
CTGAGGAACG TTTCGAGGGA AGTGGGCATT TCCTTCGAAG AGCTACAAAG GGTGCTCGAG
CCAAACGAAG CTCTGTATGC CCTCGCGGAC CATACCCGCA CCATCGCGTG GATGCTCGGC
GACGGAGTAG TTCCATCCAA CAGCGGTGCC GGATATCTCG CTAGGCTCCT CATAAGGAGG
AGCCTCAGGC TTCTTCGCAG GCTCCAGCTG GAGCTACCAC TCAGCGAGAT AGTACTGTGG
CAGATACAGT ACTGGCGCAA CGACTTCCCA GAGTACCTGG AGCTCCAGGA CGAGATACGC
GACATTGTCG ACACAGAGGA GGAGCGGTTC GAGGAAAGCG TTAAGAGGGG CGAGAAGGTG
CTCGGAGCAT TGCTCGGCGA GCTGAAGTCG AAAGGGCTAC GAGTCGTGCC AGCAGAGGAA
ATCGTAAAGC TGTACGAGTC CCACGGCGTA CCCCCCGAGC TCGTAAAAGA AAAAGCTGAG
TCTGAGGGAC TGGAAGCGGA CATCACAGGC TTCTACAGCA GGCTCGCGGA GATGAGAAGC
AGGGCTCAGG TACAGCAGAA AGAAGCCCTA CAGCTCCCCC TAGACCCCTC GCGCCTCAAG
GAGTTCCGGC CTACCCGCCT CCTCTACTAC GAGAACGAGA AGCTCGCGGA ATTCGAAGCA
ACAGTTCTCG GAGTCCTGGA CGGGAAGTAC GTCGTCCTGG ACTCCACGGC TTTCTACCCG
GAGGGCGGCG GGCAGCTCTC GGATACCGGG GTTCTCGTTT ACGAGGGAGG CGAGTGCAGG
GTAAAGTACG CGTTTAAAGT CGGAGACATA GTGGTGCACG AGTGCGAGGG CAACGCTCCA
CCGGTAGGAG CGAGGGTGAA AGGAGTAGTG GACATGGAGA GAAGGCTCGC CCTGATGAGG
CACCACACCG CTACACACAT TGTGCTTGGA GCTCTGCGGT CAGTGCTCGG GAAGCACGTG
TGGCAGGCGG GTGCGCAGAA AACGCCGGAC TATGTTCGCT TCGACTTCAC ACATCACAAA
GCTATTACGC CTGAGCAGGC TAAGGCCATA GAGGCTCTGG CGAACAGGGT GGTCATGGAG
GATAGGCCCG TCAGGAAGTA CCTCTTGAAC AGGACGGAAG CTGAGAAAGC CTTCGGCTTT
ACCCTGTACC AAGGAGGCGC GGTCCCCCAG ACGACGCTAA GAGTAGTGGA AATACCGGGC
TGGGACGCCG AAGCCTGTGG CGGAACCCAC TGCGATAGGA CAGGGGAGAT AGGGTTAATA
AAGATCCTTG GCTTCGAGAA AATACAGGAC GGCGTGGTTA GAGTGGTTTT CAAGGCCGGC
ATGCCGGCCT TGGAGTACGT GCAAGGAATG GGCGATAAGC TGAAGAACCT TCAGGAAATC
CTAGACGCGA GCTATGAGGG TCTAGAGGAA AAGGCGAAGA GCCTGAAGAG CAGGATTGAA
GCTCTCGAAA AGGAGGTGAA GAAGCTCAGG GAAGAGCTCC TCAAAGGAGG CGTCAGCGTA
AGCCCCGTAG CAACGGTTCA GGGAGTGCAG GTCTACGTGT ACTTCTCCGA TGAGTACGAG
CCACGGGAGG CCGCCCTCGC TATCTCTAGG ACGCGTACGA GTAGCGTCAT CCTTGCCTAC
AACTCGAAGG GAAACTTCGC GCTAAAAGTG ACCGACGATC TCCTCGACAG ACTAGACGCG
AGGGAGATAG GGCGCTCGGT CTGCGAGTCG TTGCGCGGCA AGGGAGGAGG CGTGAGGGAC
CTCTACCAAG GAAGGATTGA CGAGACAAAG TCCGTCGACA AAGTCATCGT AGAAGCTTTG
AGGCAGGCGT TAGAGCGCCG ATGA
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| Protein sequence | MSKEDFVNLP FFVENGWIKR TCPVCGRTFW TLDPERKVCG DQPCEEYSFI GRSVGVKPES
LSATRKMFID FFEKRNHTPV KRYPVVARWR EDVYLVGASI YDFQPWVTEG LVPPPANPLV
ISQPSIRLTD LDNVGKTGRH LTGFEMMAHH AFNIRDQRVY WANETVEYAF EVLTKVYGVK
PEEITFIFDM WSGGGNAGED YEVIVRGLEV ATLVFMHYKT AEDGSLIPIE NRIVDTGYGL
ERIYWLLTGH YNVYEAVFSG VIDRLRKLSG VEKPPDDLMY RLALKSGRLD FKKPLEALET
LRNVSREVGI SFEELQRVLE PNEALYALAD HTRTIAWMLG DGVVPSNSGA GYLARLLIRR
SLRLLRRLQL ELPLSEIVLW QIQYWRNDFP EYLELQDEIR DIVDTEEERF EESVKRGEKV
LGALLGELKS KGLRVVPAEE IVKLYESHGV PPELVKEKAE SEGLEADITG FYSRLAEMRS
RAQVQQKEAL QLPLDPSRLK EFRPTRLLYY ENEKLAEFEA TVLGVLDGKY VVLDSTAFYP
EGGGQLSDTG VLVYEGGECR VKYAFKVGDI VVHECEGNAP PVGARVKGVV DMERRLALMR
HHTATHIVLG ALRSVLGKHV WQAGAQKTPD YVRFDFTHHK AITPEQAKAI EALANRVVME
DRPVRKYLLN RTEAEKAFGF TLYQGGAVPQ TTLRVVEIPG WDAEACGGTH CDRTGEIGLI
KILGFEKIQD GVVRVVFKAG MPALEYVQGM GDKLKNLQEI LDASYEGLEE KAKSLKSRIE
ALEKEVKKLR EELLKGGVSV SPVATVQGVQ VYVYFSDEYE PREAALAISR TRTSSVILAY
NSKGNFALKV TDDLLDRLDA REIGRSVCES LRGKGGGVRD LYQGRIDETK SVDKVIVEAL
RQALERR
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