Gene Tpen_0206 details

Gene Information

• Locus tag: Tpen_0206
• ID: 4602217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 185095
• End bp: 185523
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 639772960
• Product: single-stranded DNA-binding protein
• Protein accession: YP_919619
• Protein GI: 119719124
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.347589
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAACT CGAATATCGA GACAAAAGAA GTGAAGATTG CCGACATAAC TCCAAGCACG 
CGTAGATTCT CTGTAACCTT TAAAGTTCTG AACGTGGGAG ACGAGAAGCA GATAACCTCC 
AGGAGGGACG GCTCTGAGCA TAGGGTGGCG GATGTTCTGG TGGGCGATGA GACTGGTGTC 
GCCTTGCTAA CTGCTTGGGA CAACGAGATT GACGAGTTTA GAAACATGGT TGGAGAAACC 
GTTTCCCTTG TAAACGGCTA CGTCTCACTC TACCAGGGTA AGCTCCGGCT AGGGCTCGGG 
CGGTTCGGCT CGATAAAGCC CTCCGAGACT AAGATAGAGG AGGTAAACGA GGGTAACAAC 
ATTTCGGAGA AGGAGTTCGA GGAAAGCTAC GCTCCCAGGA GAAGGGGGCG CGGAAGAAGG 
TTCTACTAG 

 

Protein sequence

MYNSNIETKE VKIADITPST RRFSVTFKVL NVGDEKQITS RRDGSEHRVA DVLVGDETGV 
ALLTAWDNEI DEFRNMVGET VSLVNGYVSL YQGKLRLGLG RFGSIKPSET KIEEVNEGNN 
ISEKEFEESY APRRRGRGRR FY