| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0180 |
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| Symbol | |
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| ID | 4600882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 154552 |
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| End bp | 155925 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639772934 |
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| Product | hydrogenase 4 subunit D |
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| Protein accession | YP_919593 |
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| Protein GI | 119719098 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.210029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGCCT TCACGAGGAG AAAGGCCTTC GAAGTAGCGG TAGCAGGCTC CCTGGTCGCT
CTAGCAGGCG TAGTGTGCAA CGCTGCTCTC TACCTCTCTA GCCAGATGAG ACCTTCCCAG
TACGTACTCG CATACTACAA CGGCTTAGCG CTTGGCTTCG TCAATGATTC CCTGAGTGTT
TTGGTAAGCC TGATGGTAGC TCTTAACGGT CTGGCCACGA TTGTTTTCTC GAAGCACTAC
ATGTCCCCGT CGAACAGAGA ACACCCGGTA AGCCTCGAGG AAACCCCGAG GTACTACGGT
TGGCTCCTTC TCTTCGAGGC ATCAGCTCTA GGCTTTGTCT ACTCGTCGAC CCTTTTGTCG
ATGGTGGCTT TCTTTGAGCT TACAAGCCTG TGCTCGTACG CACTGATAAG CTACTACGAG
GACCCAGAGT CCAGGAGATC AGGCCTGCAA GCCTTCATCG TAACACACAT CGCCGCGCTT
GGTCTATACC TCGCGGCCGG CTTGACCTAT GCGAGCACGG GGAGCGTCGA GGTGGTAGCA
CTCAAAGGGA TGCCCGAGGA GCTGAAGACC ATAGCCGAGC TCCTCCTGCT GGTAGCGGCG
GCCGGAAAGT CGGCCCAGAT ACCCTTCCAT AGGTGGTTGC CGGACGCCAT GGTTGCGCCT
ACACCTGTTT CCGCCTACCT ACATGCGGCG GCAATGGTCA AGCTAGGAGC CTACCTAATG
CTTAGAGTGC TCGTCGACGC GGGATACACG CATACAGTCG CGCTCGCATG CCTAGCTGTG
GGTGTGGTCT CCATGGCTTA CGGGTGTGCG ATGTACTTCC CGCAACTGGA CATGAAAAGA
TTACTGGCTT ACTCGACGAT AACCCAGCTC TCCTACATAT TCATGGGAGC AGGCTTGGCC
TCTCTTGGTT CAGCAATGGC CTTAAAGGGA GCAGAACTCC ACATATTTAC CCACGGCTTC
GCCAAGGAAC TGTTCTTCCT AGTAGCCGGG CTGATATCGT TCTCCGCAGG CACCAGGATG
CTCGACAAGA TAAGCGGGTT GAGAGCGGCA AGAACCGCAG CTGTAGGCTT TACCGTGGCG
GCGCTATCCG TGACGGGCGT ACCGCCCTTC GGACTTTTCT GGAGCAAGAT CCTGCTCATA
CTAGGAGGCT ACTCCGCCGG TAGCATTGTT GCAGCTATCA TCGCTACGGC GATGCTCTGC
GAGTCCATAG TGTGTTTCGC CTGGTTCCTC AGAGTATTCA CGAAATGCGT TGGAGGCGAG
CCCTCGGATG CCGTGAAAAG CATGCAAAGA GAGCCTACAA CAATGAAGAT GACAGTGTAC
TTCCTGGCCT TAATGTCGTT GCTCGCACCG TTCCTGGCTA CGCCATTCCT GTAA
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| Protein sequence | MFAFTRRKAF EVAVAGSLVA LAGVVCNAAL YLSSQMRPSQ YVLAYYNGLA LGFVNDSLSV
LVSLMVALNG LATIVFSKHY MSPSNREHPV SLEETPRYYG WLLLFEASAL GFVYSSTLLS
MVAFFELTSL CSYALISYYE DPESRRSGLQ AFIVTHIAAL GLYLAAGLTY ASTGSVEVVA
LKGMPEELKT IAELLLLVAA AGKSAQIPFH RWLPDAMVAP TPVSAYLHAA AMVKLGAYLM
LRVLVDAGYT HTVALACLAV GVVSMAYGCA MYFPQLDMKR LLAYSTITQL SYIFMGAGLA
SLGSAMALKG AELHIFTHGF AKELFFLVAG LISFSAGTRM LDKISGLRAA RTAAVGFTVA
ALSVTGVPPF GLFWSKILLI LGGYSAGSIV AAIIATAMLC ESIVCFAWFL RVFTKCVGGE
PSDAVKSMQR EPTTMKMTVY FLALMSLLAP FLATPFL
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