| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0132 |
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| Symbol | |
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| ID | 4600717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 107087 |
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| End bp | 108820 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639772886 |
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| Product | membrane protein-like |
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| Protein accession | YP_919545 |
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| Protein GI | 119719050 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1470] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGGA GAAAGTTAGC CCTGGTCGCG CTCGTATCCC TAGCCTTCGT GCTAGCCGCA
TCTATTCCTT CGTATCCGCA GTCGAATGTA TTCTTCTTTG GGAAGGTGGT CGACGAGAGC
GGGGCGCCGG TAGGGCTTGC GGAGATAACG GTGTACAAGG GGAACTCCAT AGTTACATTC
ACCAGAACCT CGCCTGACGG TAGCTTCAAC CTCTACGTAC CAGTGGGAAG CTACACGTTT
CTGGTATACA AGAAGGGCTA CGCGCCCATC TACATGACCC TCGAGGTAAC CCCTGAGAAA
GGGGGGAGCC TCGGCGTACT GGTTCTGAAG AAAGGAGTAA CCGTAGTACC CGATGTAACG
TCTGTTTATA CTTCTCAGGG AGATACCGTC AGAATACCGG TAAAAGTGTT CAACAAGTGT
CTCGACCCTG TTCTCGTAAG CTTCTCCATC GAGGTCCCCC AGGGCTGGAG AGCCTACTTC
GTGGGACCAA ACAACCTAGT AGCCTCCGAT TTCTACATAG AAGCAGGTAG CAACAGGAGC
CTGGTGTTCG TGGTAGAAGT GCCTCTAAAC GCCAGCGAAA AGGAGAGCGT GAGAGTTTCC
TTTACTTGGT TTAACCTCTC GGGACACGTT GACTTCACGT TTACGGTTAG GCAACGCGAG
TGGAGGCTCT TAGAGCTACC TACCACATCG GTGAAAAGCT TTCCTGGAGG GCAACTGTCG
ATACCCATAA ACGTGTCTAC GCCGTTCAGC TACGAGGCTA CCGTAACCCT CTCGGTGTTT
GCGCCGAGCA ACTTCATAGC CTCCTTGGTC GACGAGAACG GCTTGACTGT GCAGTCTGTA
ACGGTGAGGC CGGGGGAGAA GCGCAGGCTT CAACTAGTGA TATACGTGCC GCCCACGGCG
AGGATTTCTA CGTACAGCTT AAGGGTAGTG GCGAGGTCCG GACCTCTTCA AAGCATCGTG
AACCTCGACG TCATAGTAGA AAGCGCCTAC GACCTCCTCA AGATAAGCCC AGGCGCGACG
AGCATTAACG TGACCTCGGG TTCAACCGTT ACCTTCAGGG TAGCCTTGAA GAACGAAGGC
AACATGCCTA CAGTCGCGTT GCTAAGGGTT CAGACGAGCT CTCCACTGCT CAGGGCGTAC
ACCTCCGTAT CGGGCGAGCC CGTGGCCTCA CTCTACCTGG TGCCCGGAGA AGAGAAAGCC
TTAGCCTTGA TAGTAGAAGT TGACCCCTCC ACGCCCTCCG GGATATACCT CGTATCCCTA
CGCGCGAACG GCACTACGAG TACTGCGGAG CAAAGCTTCC TGGTAAGAGT GACCGGCACA
AGGAAGATCG TAATTTCCAA CATAATCTTC CAGGTTACCG GCGCTCCAGG AATGACGACT
ACGTACAAGC TAGGGCTGGT GAACGCTGGG AACACCCCAT TGAATAACGT TATGGTTCAA
GTGGAGGCTC CGAGCGGCGG ATTCGAAGTA ACGGTGCATC CCTCCACACT GGCTTTACCG
CCTAACTCCA CCGCAAGCGT AGACATATCG ATACTTATCC CCTCGAACGC TAGCGAGGGG
TTCTACAACC TACCCATACA CGTGGTGGCA GGCGACATCA GGCTGGACAG AGTTCTCGTG
CTCGAAGTTA GGGGGGAACA AGGACTAGGC TTCACGTATA TTGCAACCGG GCTCTTCCTC
TTGAGTTTAA CGGTGGTTTC CTACTCTAAG AGGCAGAGGA GAGCCAGGGG GTAG
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| Protein sequence | MSRRKLALVA LVSLAFVLAA SIPSYPQSNV FFFGKVVDES GAPVGLAEIT VYKGNSIVTF
TRTSPDGSFN LYVPVGSYTF LVYKKGYAPI YMTLEVTPEK GGSLGVLVLK KGVTVVPDVT
SVYTSQGDTV RIPVKVFNKC LDPVLVSFSI EVPQGWRAYF VGPNNLVASD FYIEAGSNRS
LVFVVEVPLN ASEKESVRVS FTWFNLSGHV DFTFTVRQRE WRLLELPTTS VKSFPGGQLS
IPINVSTPFS YEATVTLSVF APSNFIASLV DENGLTVQSV TVRPGEKRRL QLVIYVPPTA
RISTYSLRVV ARSGPLQSIV NLDVIVESAY DLLKISPGAT SINVTSGSTV TFRVALKNEG
NMPTVALLRV QTSSPLLRAY TSVSGEPVAS LYLVPGEEKA LALIVEVDPS TPSGIYLVSL
RANGTTSTAE QSFLVRVTGT RKIVISNIIF QVTGAPGMTT TYKLGLVNAG NTPLNNVMVQ
VEAPSGGFEV TVHPSTLALP PNSTASVDIS ILIPSNASEG FYNLPIHVVA GDIRLDRVLV
LEVRGEQGLG FTYIATGLFL LSLTVVSYSK RQRRARG
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