Gene Tpen_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0115 
Symbol 
ID4602164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp90518 
End bp90874 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID639772869 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_919528 
Protein GI119719033 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00621123 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAA ACTCTAAGGA AGTCAGGCTT AAACGCGAAA AAATCCGGGT GAACACAGTC 
ATTAAGCTCT ACACTCTCAT ACTGCTGGCG GAAGGCGAGA AGCATGGCTA CGAGCTTATG
CGAACGCTGG AACAGATGAT CGAAGCACCC ATTGGACCAT CGCAGATATA CCCATTTCTC
CGAAACCTTG AAAACGCTGG CCTTGTAACG TCTAGGGAGG CGGGGAGCCG TGACAAGAAA
GTCTACTCGC TTACTCCGCA GGGTTACGAG TTCCTGAAGG AGATACTGGA GAAGTCTCTC
AACGTTATAC AGACGGCTAT CAGGGTGCTC GGTAGGGAGA AGGTCTGTCT CCCTTAA
 
Protein sequence
MAQNSKEVRL KREKIRVNTV IKLYTLILLA EGEKHGYELM RTLEQMIEAP IGPSQIYPFL 
RNLENAGLVT SREAGSRDKK VYSLTPQGYE FLKEILEKSL NVIQTAIRVL GREKVCLP