Gene Tpen_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0101 
Symbol 
ID4601716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp79398 
End bp80129 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID639772855 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_919514 
Protein GI119719019 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.937724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAG TAGAGGATAG CGTTCAACAA AGGAAGGCTG AGCTTAGGAG AAGCGTCTGG 
AGCAAGCTTG AACGCATGGA AGTGGCTATA TCGCCGAGAC CTTGTTACGG CAAGATACCG
AGCTTCGTGG GTATTCATAG TGCGACGCAG CGCCTAATAA AGACAGACGT ATACAGGAAC
GCGCGCGTAG TGTATTCAAC ACCTGATACG TCAACAAGGC TTCTACGCGA GGAAACGTTG
AGGCGCGGCA AGACGCTCGT TGTTTCCATT CCGGGCCTAA AAGGCTATGT TATAGTCCGT
CCAGACGAGC TGGAGCCCGG AGATGTAAGG CTCGCTTCGT CAGTAAAAGG AGCGGTCACC
AAGGGAGACA GAATTACACT ACTCGAAGGC CTCAAAATAG ACTTAGTCGT CCTTGGTAGC
GTGGCCGTGA ACACGGACGG CGCGCGTCTC GGGAGGGGGG ACGGGATGCA CGACCTCGAG
TACGCACTTC TACGCGAAAT GTACGCGGTC GCTGAGTCTA CCCCCGTAGC CACGCTGGTT
CACGACTTAC AGATACTCGA AGAGCCTATA CCCATGCTCA TGCACGACGT GCCTATTGAC
TACATAGCTT CTCCGTACAG GCTGATCACC GTCGAGAGGA AGCATCGGAA GCCTCCCGGC
GTAATATGGG AGATGCTGCC TATCGACTTC ATAAAGTCGA CGCCTATACT CAGGAGGCTT
TTCGGCATCT AG
 
Protein sequence
MSRVEDSVQQ RKAELRRSVW SKLERMEVAI SPRPCYGKIP SFVGIHSATQ RLIKTDVYRN 
ARVVYSTPDT STRLLREETL RRGKTLVVSI PGLKGYVIVR PDELEPGDVR LASSVKGAVT
KGDRITLLEG LKIDLVVLGS VAVNTDGARL GRGDGMHDLE YALLREMYAV AESTPVATLV
HDLQILEEPI PMLMHDVPID YIASPYRLIT VERKHRKPPG VIWEMLPIDF IKSTPILRRL
FGI