| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0041 |
|---|
| Symbol | |
|---|
| ID | 4600982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 29704 |
|---|
| End bp | 30792 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639772794 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_919454 |
|---|
| Protein GI | 119718959 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.821324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA AGTTGCTGGG TAAACCGTTC GTCAGGGAGG CGGCATTCTG GGAGCCGGTT
CAGGGGAAGC CGGGCTACGT GAAGTGCAAT CTCTGCAACA GGAGGTGCGT GATAGCCCCC
GGTAGGTTCG GGGTTTGCGG TGTGAGGAAG AATATCGACG GCAAGCTTTA CACGCTGGTC
TACGGCCTCT TGACAGCCGC GAATCTAGAC CCTATCGAGA AGAAGCCTCT CTCCCACTTC
TACCCGGGTA GCGCGGTGTT CTCGGTGTCC ACGCCCGGCT GCAACTTTTT CTGCCAGTTC
TGCCAGAACT GGGAGATAAG CCAGAGCAGG CTGGAGAGAG GGCTCTACGG GCACTACTAC
CCCCCGGAGG ACGTCGTAAG GGAGGCTAAG AGGCTGCAGG CGGACGGGAT CTCGTACACC
TACAACGAGC CAACGATATT CTACGAGTTC ATGCTGGACA CTGCGCGCCT AGCGAAGAAG
GAGGGCCTCT TCAACACGAT GGTTACGAAC GGCTACATAT CCCCGGAGGC CCTCGACGAG
CTGGCGCCCT ACCTGGACGC CGCCACCGTG GACTTCAAGG GAGGAGGCGA CCCGGAGTTT
TACAGAAAGT TTATGGGGGT GCCAGACCCA AGCCCCATCT ACGACACGTT GCTCAGAATG
AAGGAGAAGG GGATCCACGT AGAGATAACG AACCTTGTGG TTCCAATAGT GGGCGACGAC
GAGGAGAAGC TGAGGTCCCT GGCTAGGTGG GTAGCGGAGA ACTTGGGCGA CGAGACGCCC
TTCCACCTCC TGAGGTTCTA CCCCCACTAC AAGATGATCG ACTACCCGCC GACGGAGGTC
GGGGACCTCG AAAAGCTCGC GGGGGTGGCG AGGGAGGAGG GGCTCAAGTA CGTCTACATA
GGGAACGTGT GGGGGCACCC CCTCGAGAAC ACTTACTGCC CGAAGTGCGG CCACAGGGTC
ATAGAGAGGA GGGGCTTCTT CATAGTGAAG TGGGATTTAA CGGAGGACAA CAGGTGCCCG
GTGTGCGGCG CGAAGATAAA CATAAAGGGG AGCTACAGGA AAAGAAGCTG GGACGTCTTC
TTCTACTAG
|
|---|
| Protein sequence | MSDKLLGKPF VREAAFWEPV QGKPGYVKCN LCNRRCVIAP GRFGVCGVRK NIDGKLYTLV
YGLLTAANLD PIEKKPLSHF YPGSAVFSVS TPGCNFFCQF CQNWEISQSR LERGLYGHYY
PPEDVVREAK RLQADGISYT YNEPTIFYEF MLDTARLAKK EGLFNTMVTN GYISPEALDE
LAPYLDAATV DFKGGGDPEF YRKFMGVPDP SPIYDTLLRM KEKGIHVEIT NLVVPIVGDD
EEKLRSLARW VAENLGDETP FHLLRFYPHY KMIDYPPTEV GDLEKLAGVA REEGLKYVYI
GNVWGHPLEN TYCPKCGHRV IERRGFFIVK WDLTEDNRCP VCGAKINIKG SYRKRSWDVF
FY
|
|---|
| |