| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4892 |
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| Symbol | |
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| ID | 4595273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 223083 |
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| End bp | 224876 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772677 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_919337 |
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| Protein GI | 119714195 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.123982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCGTT CCGCGAGCGT TCCGATCTGT GGACTGGTCG GAGCCGTGGG CGGCTCATAC
GATTCGGAAG TGGAAAAGGT GGCGATCCAA CTCCTGGGCG GGTTCTCGGT CACGGTCGAC
GGCACCCCCG TTGCCGGGGA CAGCTGGCGG AGCCGGCGCG CGGCCGATGT GCTCAAGTTG
CTCGCGCTCT CGCCTGACCG CCGGCTCCAC CGGTCGCAGG TGATGGAGGC GTTCTGGCCC
GACAGCGATC CGCAGGCGTC CGGCACCAGC CTCCGCAAGG CGCTGCACTT CGCTCGACGC
GCCACGGGAG ACGAACAGGT GATCGTGAGC GAGCAGGGCT TGCTCGTGCT GTGGCCGCAC
GCCGAGGTCG ACATCGACGC CGAGCGCTTC GAAACCGCGG CACGCCGGGC GCTGGCGACA
GATAACTCCG CGGCCTGCCG CGACGTCGTG GACTTGTATG GCGGCGACCT GCTTCCCGAT
GATCGCTACG AGTCCTGGTT GGCCGAGCCA CAACACCGGT TGCGGCAGCG CTACCTGGAT
TTGCTGCGCG TCGGATCTCT GTGGGCGCGG CTGGCCGAAG AAGACCCCAC CGACGAGCAG
GCAGCCCGCT CGCTCATGCG CGCCCACCTC GACGCCGGCG AGCGCCGCGA GGCGATCCGG
CGCTTCGAAA GGCTCCGCGA GGCCCTGCAC GACCAACTCG GCGTCGGGCC GGACCGCGCG
ACAATCGCGC TCTACGAGGA AGTCCTCGCT GTCGAAGGCG CCCCCAAACC CACGGAGGCC
GAACGGGCGC ACGCGCTGCT GGCCTGGGCT CTGGTGCACA TGAACCGAAA CGAGATCGAG
GAAGCCGAGC GCGCCGCAGA GGAAGCGCGC GCCATTGCCC TCGACTCTGG CCTGGGCCGC
GAACTCGGCG AAGCCGCGGT CATCCTGGCC AAAGTCGCCA TGGCTCAAGG CCGATGGCGA
GAACGATTCG CCGAGGAACT CGGCGAATCC ATGCGGCTGC GGGCCAACAT GGAGCCCATC
GTGTACGACG CCCACCTGTG CCTCGCCGAG TACTACCTCG CGGCGCCCGA CGGCTACGAC
CTCGCCGCAG ACTTCGCCCG CCAGATGATG CAGATCGCCG ACGAGGCCGG GTCGGCGACC
GGTGCCGCCC TCGCCACGCT CATGCTCGGC GAAGCCGAAC TACTCGCCGG CCACCTCATC
GAGGCCGAAC AACACCTCAA GGAGGCGGCC GAAGCCAACG ACCACGAAGG CTGCCTCTCC
GGGTCAGCCC TCGCCCGACA ACGGCTCGCC GAAGCCGCTG TGATCAACGG CCGCAAGTTC
GACGCCAACC GACTGCTCAC CCGTGCCCGC TCCATCGCGG TCCGCTCCGA CCTCGCCAGC
CACCTCATGG TTCGCGTCTT CGGCACCATG ATCCAGGCGG CCGACCCAAC GCACACCCTC
ACCGTTCTGC GCACGGCAGA GCGCGAGCTC GCCCAGATGC GATCGTGCGA GCCCTGCTCG
ATGGGCTACC TGACCAGCGC CGCGGCCGCC TGCGCACGAG CCGGCGAACT GGACCGAGCA
CGCGCCTTCA TCACCGAAGC AGAGCGGATC GCCGGCATGT GGCAAGGCGG CCTGTGGAAC
GGCGCCGTCT GGGAAGCTCG CGGCGTACTC CGCCACGCCG AAGGCGCGCC CGAACAGGCC
CGTGCGATGT ACCGAGAAGC CGCACAGGAA TACACGCGCG CTGGAAACCA GTCCGATGCT
GCCCGGTGCG CGGAAGCCGC CAGCCAGCTG CAGAACCACG CCACCGCGGA GTAG
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| Protein sequence | MDRSASVPIC GLVGAVGGSY DSEVEKVAIQ LLGGFSVTVD GTPVAGDSWR SRRAADVLKL
LALSPDRRLH RSQVMEAFWP DSDPQASGTS LRKALHFARR ATGDEQVIVS EQGLLVLWPH
AEVDIDAERF ETAARRALAT DNSAACRDVV DLYGGDLLPD DRYESWLAEP QHRLRQRYLD
LLRVGSLWAR LAEEDPTDEQ AARSLMRAHL DAGERREAIR RFERLREALH DQLGVGPDRA
TIALYEEVLA VEGAPKPTEA ERAHALLAWA LVHMNRNEIE EAERAAEEAR AIALDSGLGR
ELGEAAVILA KVAMAQGRWR ERFAEELGES MRLRANMEPI VYDAHLCLAE YYLAAPDGYD
LAADFARQMM QIADEAGSAT GAALATLMLG EAELLAGHLI EAEQHLKEAA EANDHEGCLS
GSALARQRLA EAAVINGRKF DANRLLTRAR SIAVRSDLAS HLMVRVFGTM IQAADPTHTL
TVLRTAEREL AQMRSCEPCS MGYLTSAAAA CARAGELDRA RAFITEAERI AGMWQGGLWN
GAVWEARGVL RHAEGAPEQA RAMYREAAQE YTRAGNQSDA ARCAEAASQL QNHATAE
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