Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4882 |
Symbol | |
ID | 4595265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 213973 |
End bp | 214677 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639772667 |
Product | hypothetical protein |
Protein accession | YP_919327 |
Protein GI | 119714185 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCTG ATCCGTTTGT CGCACTCGGT GAGTACCTCA CCGCAAGCGA AGCCGAAGCT CTCGCGGTCC AGTTCGACAA CGGCCAGCAC ATCATCAAGG CGTTGGCCGC GATCAACTCC GCCCGACGTG AGGACGCCAA GGAGTTGCTG GCAGCGGCCG AGCTCGACCA CACCGATCGT GCCCGAGCCG CCGCGGTGCT GCGGGGGATC ACAGGGGCAA AGTCGGTCCA CCGCGATCTG ACTCCTGTGT GGACGATGCC TGGCAACGAA GCCAAGGTCG GTCACCTCAC CGGCGAATTC CATCGACTCG TTCAGGCCGC ACGGATCTCA GTCACCTGCG CCACCTACAA CTTCGAGAAG ACCTCGCAGA TGTGGACCGT ACTCAAGGAA GCTGCCGAAC AGCCTGGTGT CGTCGTGACC GTCTACGTCG ACGGAGACAA AGCCGACGCC ACCAAGGTCA AGGCCCAACT CCCGCGAGCA ACGACCTACC GATCCGCGGA GCTCCCGTCG GGCCAGCGCG TCGTCAGCCA CGCCAAATTC ATCGTCATCG ACCACGAAGT CCTGCTGCTG ACCAGCGCCA ACTTCTCGTT CAGCGCCGAG AACCGCAACG TCGAGTTCGG CCTGCTAGTC CGCGACGCTG CACTCGCGAA GTCCGTCGAG TCCACCATGA CAAGCAAGCA CGGGACTCTG TATGAGTTGG TCTGA
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Protein sequence | MPSDPFVALG EYLTASEAEA LAVQFDNGQH IIKALAAINS ARREDAKELL AAAELDHTDR ARAAAVLRGI TGAKSVHRDL TPVWTMPGNE AKVGHLTGEF HRLVQAARIS VTCATYNFEK TSQMWTVLKE AAEQPGVVVT VYVDGDKADA TKVKAQLPRA TTYRSAELPS GQRVVSHAKF IVIDHEVLLL TSANFSFSAE NRNVEFGLLV RDAALAKSVE STMTSKHGTL YELV
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