Gene Noca_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4882 
Symbol 
ID4595265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp213973 
End bp214677 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID639772667 
Producthypothetical protein 
Protein accessionYP_919327 
Protein GI119714185 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTG ATCCGTTTGT CGCACTCGGT GAGTACCTCA CCGCAAGCGA AGCCGAAGCT 
CTCGCGGTCC AGTTCGACAA CGGCCAGCAC ATCATCAAGG CGTTGGCCGC GATCAACTCC
GCCCGACGTG AGGACGCCAA GGAGTTGCTG GCAGCGGCCG AGCTCGACCA CACCGATCGT
GCCCGAGCCG CCGCGGTGCT GCGGGGGATC ACAGGGGCAA AGTCGGTCCA CCGCGATCTG
ACTCCTGTGT GGACGATGCC TGGCAACGAA GCCAAGGTCG GTCACCTCAC CGGCGAATTC
CATCGACTCG TTCAGGCCGC ACGGATCTCA GTCACCTGCG CCACCTACAA CTTCGAGAAG
ACCTCGCAGA TGTGGACCGT ACTCAAGGAA GCTGCCGAAC AGCCTGGTGT CGTCGTGACC
GTCTACGTCG ACGGAGACAA AGCCGACGCC ACCAAGGTCA AGGCCCAACT CCCGCGAGCA
ACGACCTACC GATCCGCGGA GCTCCCGTCG GGCCAGCGCG TCGTCAGCCA CGCCAAATTC
ATCGTCATCG ACCACGAAGT CCTGCTGCTG ACCAGCGCCA ACTTCTCGTT CAGCGCCGAG
AACCGCAACG TCGAGTTCGG CCTGCTAGTC CGCGACGCTG CACTCGCGAA GTCCGTCGAG
TCCACCATGA CAAGCAAGCA CGGGACTCTG TATGAGTTGG TCTGA
 
Protein sequence
MPSDPFVALG EYLTASEAEA LAVQFDNGQH IIKALAAINS ARREDAKELL AAAELDHTDR 
ARAAAVLRGI TGAKSVHRDL TPVWTMPGNE AKVGHLTGEF HRLVQAARIS VTCATYNFEK
TSQMWTVLKE AAEQPGVVVT VYVDGDKADA TKVKAQLPRA TTYRSAELPS GQRVVSHAKF
IVIDHEVLLL TSANFSFSAE NRNVEFGLLV RDAALAKSVE STMTSKHGTL YELV