| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4874 |
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| Symbol | |
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| ID | 4595250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 206357 |
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| End bp | 208153 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772659 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_919319 |
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| Protein GI | 119714177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0766872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCTG ACCTGCCAAT CGAGGACTAC GGCCTGCTCG GAGACACCCG GACCGCCGCG
CTGGTGAGCT CGCACGGATC CATTGACTGG ATGTGCTTCC CGCGGTTCGA TAGCCAGCCC
GTCTTCGGCC GACTCATCGG CGGACCCGCC GCGGGCAGCT ACCGCCTCGG TCCGGCGGGA
CCGGCGACGC TGATCAGCCG CCGGTACCAC GACCACTCCG CCACCATCGA GACGACCTGG
CGAACCACTG CAGGACGACT CACCCTCACC GAAGGCATGG TCGCCGAGGT CAGCGGCCAG
CTCCTGCCCT CGACCATGCT CGTGCGACGC GTGACCGCCC CTGATGCCCC GGTCGATGCC
GTCATCGAGA TCGACCTCCG CCTCGGTGAC GGGCACCAGC GCCCGCGCAC CCAGTTCCGT
GGCAACGCCT TGGTCTGTGA CTGGCGCGGG CTCGCCACTG CCCTGACAAC CAGCTCGAAC
ATGACCGTCG AACCCAGCGT CCCCCACATC GTGACCGTCA CCCCCGGTCG CCCTTTCACC
GCCGTACTGA GCTTCGCGGA GCGAGAGCCC TTCGTCCACA TCGATCCGGA CGCCGCCTAC
GACGTACTCG AACGTGACGA ACTGCGCTGG CAGGCATGGT CGCGCGACAT CGACCCCGAC
CTACCCCACC GCGACGCCGT AGTCCGCAGC CTGCTCACCC TTCGCCTGCT GACCTACTCA
CCCTCCGGCG CTCCGGTCGC TGCACCGACC GCCTCCCTTC CGGAAGACCT CGGCGGCGTG
CGCAACTGGG ACTACCGGTA CGCGTGGCCG CGAGACGCCA GCATCGGCAT CGGCGCGTTC
CTGGGAGTCG GCAAACATGA CGAGGCGCGT GCCTTCCTGG CCTGGCTGCT CAGCGGCACT
CGCCTCGACC GTCCCCGACT ACCCGTGCTG CTCACCCTGC ACGGCAAAAC CCCGACGCAC
GAACGGACAC TTCCGGGCTG GCCCGGATAC GCCAGCAGCG CACCCGTCCG GATCGGCAAC
GCTGCCGCCG ACCAACACCA GCTCGACGGG TACGGCTGGG TGATCGACGC CGCGTGGCTG
CTCACCCAGG CAGGGCACCG GCTCTACTCC GAGACCTGGC GCACCATGTC CGGATTCGCC
GACACCGTCG CGAGCCGGTG GCGCGAACCG GACGCCGGAA TCTGGGAGGT GCGCACTGAT
CCCGCCCACC ACGTGCACTC CAAGATGATG GCTTGGCTGG CTCTCGACCG CGCACTCCGT
ATCGCCGCAA GCCACCGAAC GAGCGCGGTG CGACTCACTC GATGGGCCCT CGCCCGTGCG
GCCCTGCACC AAGAGATCTC GCAGCGCGGC TTCAACCCCG ACACGAGCAC CTACACGCGC
ACCTACGGAT CGGCCGATAC CGACGCCGCA CTGCTGATCC TTCCGCTGCT CAACTTCGAC
CCACCAGACT CCCCACGTGT CCGCGGAACG ATCGACGCCA TCACCCGCGA CCTCGACGCC
GGCACACCTC TCCTGTACCG ATACCCACCT GGACAAGACG GGCTTCCTGG TAAGGACGGC
GCCTTCCTGC CGTGCTCATT CTGGCTCGTC CAAGCGCTCG CCCGAACCGG ACGACAAGAA
GAGGCGGAGG AGCTTTTCCA AGAACTCCTG ACGCTGGCAA GCCCCCTTGG GCTATACGCA
GAAGAGATGG ATCCCGTTAC GCGTCACCAC CTCGGCAACT ACCCCCAGTC CCTCACCCAC
GCAGCCGTGG TTCAGGCGGC GCTCGCCCTC CGAGACGGCG CGGCCGGAAT CCCCTAG
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| Protein sequence | MSPDLPIEDY GLLGDTRTAA LVSSHGSIDW MCFPRFDSQP VFGRLIGGPA AGSYRLGPAG
PATLISRRYH DHSATIETTW RTTAGRLTLT EGMVAEVSGQ LLPSTMLVRR VTAPDAPVDA
VIEIDLRLGD GHQRPRTQFR GNALVCDWRG LATALTTSSN MTVEPSVPHI VTVTPGRPFT
AVLSFAEREP FVHIDPDAAY DVLERDELRW QAWSRDIDPD LPHRDAVVRS LLTLRLLTYS
PSGAPVAAPT ASLPEDLGGV RNWDYRYAWP RDASIGIGAF LGVGKHDEAR AFLAWLLSGT
RLDRPRLPVL LTLHGKTPTH ERTLPGWPGY ASSAPVRIGN AAADQHQLDG YGWVIDAAWL
LTQAGHRLYS ETWRTMSGFA DTVASRWREP DAGIWEVRTD PAHHVHSKMM AWLALDRALR
IAASHRTSAV RLTRWALARA ALHQEISQRG FNPDTSTYTR TYGSADTDAA LLILPLLNFD
PPDSPRVRGT IDAITRDLDA GTPLLYRYPP GQDGLPGKDG AFLPCSFWLV QALARTGRQE
EAEELFQELL TLASPLGLYA EEMDPVTRHH LGNYPQSLTH AAVVQAALAL RDGAAGIP
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