| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4866 |
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| Symbol | |
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| ID | 4595242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 196710 |
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| End bp | 198110 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772651 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_919311 |
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| Protein GI | 119714169 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGG CAGGGGGCCG ACCGGTCCAC GCCCCAGGCT CGTCGCCTCA GGACGTGACG
CCACCTGCGG AACCGCGTTT GCCGGGCCCC GGCAGCGTGT CGTGTACTGG TAGGCCGAGG
CCAAGTGAGG CGATGCGCAT GAAGAACACC GGGGCCAACC GCAACCCGAG CAGTTCGGTG
CGTCGGACCG AGTGGGCCGA CCAGGAGTGG CTGGTTCGGG CGGCCGAAGG CGCGAGCCAG
GACGCCGGCG TACCGGTCGC TCTGCTGGGC GACTACCTGC CCATGCTTGC CGAGGCAGCC
ACGCACGGCG AGTTTCCTGG CCGGGACCAG ATCGACGCGG TCCGCCGCCA GGGCCGTCAC
GCTGCGGAGC AAGGAGTCCC GGTCGGTCGA GGCGTCGATC TCTACCTCTC CGCAGCCCGG
CGCGTGTGGA GCGAGCTGCC CGCGGTCGTT CGTGAGCGGG ACAGATCGGC TGTCCGCGCG
GCCGCTGAGG CGGTCCTGCA CGTCGTTGAC GACGCGGTCG CGGCATTTGC CGAGGGCCAC
GCCGAGGCCG GGCGCGAGTT GGTCCGCCGG GAGGAGACCC TGCGACGAGA GCTGATCGAG
GACCTGCTCC GCGGCGATGC TCATCTCAGT GACCTTGTGG AGCGGGCGGA ACCCTTTGGA
CTCGACCTGA CTCGTGCCCA CCAGGTCGCC CTCGCTCAAC CGGGCAAGCG GCTCCCGTCG
ATCGCCGCCG CAACGACTTC ACTGGAACGA GTCGTCTTGG ACCGTTTCGG TGACCGGGAC
GTCCTGGTCG CAACGAAGGA AGGATGGGTT GTCGTCATCG CCCTGGCCGA CGCCACCGGC
GCCCCACCGA CGTCCGGCGG CCTGGGAACA ACCGGTGACC TCGGAAAGAT CGTGTACGGC
GAGCTCTCCC GGCTGAGGCG GGGACGTCCC TGGCGGGTGG CGGTGGGTCG CGCTCACCCC
GGTGCGTACG GGATCGCCCG CTCCTACGAA GAGGCTCGTG AGGGCATGAC CATGGCCACC
CGCATGCAGT TGGACCGGCC GATCGTCGAG ACCCGAGACC TCCTGACCTA CCGAGTGCTC
GCCCGAGACC AGCCCGCCTT GGTCGACCTG GTGCACTCGG TGCTCAACCC GCTCCATCAG
GCCCGGGGAG GCGCCCAGCC GCTGGTGGAA ACCTTGGCGG CTTACTTCAA CTGCGGCTGC
GTCGCAACCA CGACGGCCAC CACGCTCCAC CTCTCGGTCC GGGCAGTGAC CTACCGCCTT
GACCGCGTCA AGGCACTCAC CGGTTTCGAT GCGCTCGACC CGGCCCATCG CTTCACGCTG
CAGGCGGCCG TCCTCGGCGC GAGGCTGCTC GGCTGGCCCG AACGGCCGCT CCCGCAGGCC
TCAGCCCCTG GGTCGACGTA G
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| Protein sequence | MPQAGGRPVH APGSSPQDVT PPAEPRLPGP GSVSCTGRPR PSEAMRMKNT GANRNPSSSV
RRTEWADQEW LVRAAEGASQ DAGVPVALLG DYLPMLAEAA THGEFPGRDQ IDAVRRQGRH
AAEQGVPVGR GVDLYLSAAR RVWSELPAVV RERDRSAVRA AAEAVLHVVD DAVAAFAEGH
AEAGRELVRR EETLRRELIE DLLRGDAHLS DLVERAEPFG LDLTRAHQVA LAQPGKRLPS
IAAATTSLER VVLDRFGDRD VLVATKEGWV VVIALADATG APPTSGGLGT TGDLGKIVYG
ELSRLRRGRP WRVAVGRAHP GAYGIARSYE EAREGMTMAT RMQLDRPIVE TRDLLTYRVL
ARDQPALVDL VHSVLNPLHQ ARGGAQPLVE TLAAYFNCGC VATTTATTLH LSVRAVTYRL
DRVKALTGFD ALDPAHRFTL QAAVLGARLL GWPERPLPQA SAPGST
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