| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4860 |
|---|
| Symbol | |
|---|
| ID | 4595238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | - |
|---|
| Start bp | 191272 |
|---|
| End bp | 191919 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772645 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_919305 |
|---|
| Protein GI | 119714163 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2345] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.447451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC GACGTGAAGC GGTGCTCGAC GCCCTGCGCT CCTCCGAGGC ACCGATGAGC
ATCCTCGACC TGGCCCACCA ACTCGGCCTG CACGCAAACA CCGTGCGCTT CCACCTCCAG
GTTCTCGCCG ACAGCGGCCG GGTCGAACGA GTCGAGCCGA CACGCAGCTC ACCGGGCCGA
CCGCCGCTCA TGTTCCGCGC CCACCGCGGC ATGGACCCGG CCGGCCCTCG CAATTACCAG
CTCCTCGCCG ACGCCCTGGC GACCCGCCTC AGCGCCGACA ACGAGTCCAC CGACAAGGCC
GTCGAGGCGG GCCGGGCCTG GGGGCACAGG CTAGCCGCGG GCACACGCTC GACGACGGCA
GTCACCACCG ACGACCAGGC GACCGATCAG CTGGTCGAGA TGCTGGGAGA ACTCGGTTTC
TCCCCGCAGC GTCGATCCTC GGGACGCCGG GCCCAGATCG CGCTGAGGCA CTGCCCGTTC
CTCGACCTCG TCCCCGAGCA CGAGAACGTG ATCTGCCCGG TTCATCTTGG CCTCATGCAA
GGTGCCATGG CGGCGATGAG CGCAGCGGTC ACCATCGAGC GCCTCGAGCC GTTCGCCGAA
CCCGATCTGT GCCTGGCGCA CGTGGGATCC GCGGAAGCGA CAGCGTGA
|
|---|
| Protein sequence | MPERREAVLD ALRSSEAPMS ILDLAHQLGL HANTVRFHLQ VLADSGRVER VEPTRSSPGR
PPLMFRAHRG MDPAGPRNYQ LLADALATRL SADNESTDKA VEAGRAWGHR LAAGTRSTTA
VTTDDQATDQ LVEMLGELGF SPQRRSSGRR AQIALRHCPF LDLVPEHENV ICPVHLGLMQ
GAMAAMSAAV TIERLEPFAE PDLCLAHVGS AEATA
|
|---|
| |