Gene Noca_4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4852 
Symbol 
ID4595449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp183564 
End bp184280 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID639772638 
Producthypothetical protein 
Protein accessionYP_919298 
Protein GI119714156 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGA GCACGCAGGC CGCCGGCATC GGGACCCTCG CCGATGAAAC CCGCAGGGCG 
CTGTATGAGT ACGTGTCCGG GCAGCCCGAG CCGGTAGGCC GCGAGCAGGC TGCGGCTGCG
CTCGGGCTGG CCTCGCACAA CGTGAACTTC CACCTTGACC GGCTGGTGAC CGAGGGCCTG
CTGGAGGTGG AGTACCGGCG CCTGAGCGGA AAGACGGGGC CCGGCGCGGG TCGGCCGAGC
AAGCTCTACC GCCGCGCCTC CCGGGAGTTC GCCGTCTCCC TGCCACCGCG ACGCTACGAC
CTGGTCGGCG ACATCTTGGC GGCCGCGGTG ACCCGCGCCG CCGAGGGCGC ACCCTTGGAC
CAAGCGCTGC ACGAGTGTGC CCGCCGCCAG GGGCTGTCGC TGGGACAGGA CGCAGAAGGT
CTCGATCGCT CCGAGTCGCT CCATGCCTTG GCCGAGGTGT TGCGCAGCCA GGACTTCGAG
CCACAAGTCC GAGACGACGA GCTGGTGCTC TCCAACTGCC CATTCGACAC CTTGGCTCAG
AAGCACACCG CGCTGGTGTG TGGACTCAAC CAGGCGTTCG TGCAGGGAGT GGCTGACAGC
CTCGACTCCG ACATCACTGC GCACCTGGAG CCCGAGCCCG GCAAATGTTG TGTCAAGGCG
CGGCCAGCAT CGGCGTCCGT GCGCCGAGTC GTCGAGGACC CCGACCTCCC GTCATGA
 
Protein sequence
MDLSTQAAGI GTLADETRRA LYEYVSGQPE PVGREQAAAA LGLASHNVNF HLDRLVTEGL 
LEVEYRRLSG KTGPGAGRPS KLYRRASREF AVSLPPRRYD LVGDILAAAV TRAAEGAPLD
QALHECARRQ GLSLGQDAEG LDRSESLHAL AEVLRSQDFE PQVRDDELVL SNCPFDTLAQ
KHTALVCGLN QAFVQGVADS LDSDITAHLE PEPGKCCVKA RPASASVRRV VEDPDLPS