Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4852 |
Symbol | |
ID | 4595449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 183564 |
End bp | 184280 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639772638 |
Product | hypothetical protein |
Protein accession | YP_919298 |
Protein GI | 119714156 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTGA GCACGCAGGC CGCCGGCATC GGGACCCTCG CCGATGAAAC CCGCAGGGCG CTGTATGAGT ACGTGTCCGG GCAGCCCGAG CCGGTAGGCC GCGAGCAGGC TGCGGCTGCG CTCGGGCTGG CCTCGCACAA CGTGAACTTC CACCTTGACC GGCTGGTGAC CGAGGGCCTG CTGGAGGTGG AGTACCGGCG CCTGAGCGGA AAGACGGGGC CCGGCGCGGG TCGGCCGAGC AAGCTCTACC GCCGCGCCTC CCGGGAGTTC GCCGTCTCCC TGCCACCGCG ACGCTACGAC CTGGTCGGCG ACATCTTGGC GGCCGCGGTG ACCCGCGCCG CCGAGGGCGC ACCCTTGGAC CAAGCGCTGC ACGAGTGTGC CCGCCGCCAG GGGCTGTCGC TGGGACAGGA CGCAGAAGGT CTCGATCGCT CCGAGTCGCT CCATGCCTTG GCCGAGGTGT TGCGCAGCCA GGACTTCGAG CCACAAGTCC GAGACGACGA GCTGGTGCTC TCCAACTGCC CATTCGACAC CTTGGCTCAG AAGCACACCG CGCTGGTGTG TGGACTCAAC CAGGCGTTCG TGCAGGGAGT GGCTGACAGC CTCGACTCCG ACATCACTGC GCACCTGGAG CCCGAGCCCG GCAAATGTTG TGTCAAGGCG CGGCCAGCAT CGGCGTCCGT GCGCCGAGTC GTCGAGGACC CCGACCTCCC GTCATGA
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Protein sequence | MDLSTQAAGI GTLADETRRA LYEYVSGQPE PVGREQAAAA LGLASHNVNF HLDRLVTEGL LEVEYRRLSG KTGPGAGRPS KLYRRASREF AVSLPPRRYD LVGDILAAAV TRAAEGAPLD QALHECARRQ GLSLGQDAEG LDRSESLHAL AEVLRSQDFE PQVRDDELVL SNCPFDTLAQ KHTALVCGLN QAFVQGVADS LDSDITAHLE PEPGKCCVKA RPASASVRRV VEDPDLPS
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