| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4844 |
|---|
| Symbol | |
|---|
| ID | 4595440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | + |
|---|
| Start bp | 173952 |
|---|
| End bp | 176033 |
|---|
| Gene Length | 2082 bp |
|---|
| Protein Length | 693 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639772631 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_919291 |
|---|
| Protein GI | 119714149 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0385105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC TGAACCACCC CCTCAGCGCG GTGTTCCGAC CGCGCCGGGT CGCCCTCGTC
GGCGCCTCCG ACCGGCCGGG AAGCGCGGGT GCGCTGTTCT GGGAGAACCT CTCCGGATTC
ACCGGAGAGG TTCTCCCAGT CAACGGATCT GGACGCGCAG TGGCAGGCGT CCGGGCCTAT
CGAAGCCTCA CCGAGATCCC GGGGTCGATC GACCTCGCCG TGCTGGTCGT GCCCGCGTCT
GCCGTCGCCG CGGTCGTGCG AGATGCCGGT GCAAAGGGCA TCCCGGCTTG TGTAGTCATC
ACCTCGGGTT TCGCCGAGGC CGGGCCGGAG GGTGAGCGGC TGCAGGCCGA GGTCATGGCC
ATCGCCCGTG CCGGCGGTGT CCGCATCGTC GGACCCAACT GCTTCGGCGT CCAGAACGCT
GAGGTCGGCT TCAATGCCTC CCTGTCACCG CGTCTGACGG CGAGCGCCGG CTCGCTGAGC
CTGGTCACCC AATCGGGCGC CTACGGTATG GCGCTGCATT CCTTGGCCCA GGACGAGAAC
CTGCGCTTCA ACAAGGTGTA CGCCACCGGG AACAAGGCGG ACCTCACCGA CACAGAGCTC
CTTGACTACC TGGACTCCGA GGGCGGCTCC GGGCCGATCT GCTTCTTCCT GGAGTCCCTG
CCGGACGGTC GGGCCTTCTT CGAAGCGGCA CGTCGGGTCA CGCGCAACAG GCCCGTGATC
GTCTGCCGGA CTGGGAGGTC CACTGCCGGT AGCCGCGCCG CCTGCTCACA CACAGCGAGC
CTCGCAGGCC AGCAACGCGT CTGGTCCGCG GCGTTCGCGC AGGCCGGCGT GATCGTGACC
AAGTCCGGTC TGGAGATGCT CGACGCGGCC CGTGCACTCG ACGGTGGCCA TCATCCGGCG
GGGCTCCGGG TCGGGATCGT GACGAACTCC GGCGGCACAG GAGTCGAACT GACCGACCTC
CTCGCGGACG AAGGACTGGA CGTTCCGCTG CTCAGCGCAC CGTTGCAAAC CAAGCTCGCA
GAGACGCTTC CCGACCTCGC CAGCCCCAGC AACCCCGTCG ACCTGACCAC AGCCTGGCAA
CGCTTCACCG AGCTCTACCC ATTCGCCATC GAACAACTCG TCCGAAGCGG CGAGATCGAC
GCGGTGATCG CCGTACTGCT GCAGCGCTCG GCCGATGAAG GCGTCGCAAC CGCCGTAGCT
GAGAAGGTGC AGCAACTGCG CGCCGAGGGC GTCACCGTGC CCGTCTACGT CTGCTGGGTC
GCCGCCCACG ACGACCGCGC GAACGCGGCG CCACTGCGCT GCGCGGGCGT TCCCGTCTTC
GAGTGGCCCG AACGAACCGC GCGTGCGGTC GGGCACGCCG CGCGCTATGG AGCCTGGCTG
CGGCCGGAAG GCTCGTGGCT GACGCTCGAC CGCAGGGTAA GTGTCGAGCC AGGGCTCGGG
GAACAAGCCA CAGGGTGGCT CCCGGTCGGC GAGTCCGCGT TCTTGTTGGC CGAGCACGGA
CTTCCGCTGG TCCCGTGGTC CCTGTGCGGG AGCGTCGCCG ATGCGGTGCA GGTAGCGGAG
TCGTTCGGTT ACCCGGTGGT CCTCAAGGCC ATCCATGCAG ACTTGCTGCA CAAGTCTGAT
GCCGACGGAG TTCGCCTTGG ACTCACTGGA CCCGACGAAG TCGCTGCTGC AGGCGAATTC
CTCCTGAAGT TCCGCGAGGG CACAGAACTG CTCGTGCAGC AGCAACACAG CGGCGTCGAG
GTCATCGTGG GCGGAGTGCG CGACGCTGAG TTCGGCCCGG TCGTGCTCGT CGGCATGGGG
GGTGTCGACG TGGAAGTCCA GGACGATGTT GTCCTCGCCC TTGCCCCTCT TCTGCTCCCC
GAAGCCGAGG CGATGGTGCG GCGACTCAGG GGTGCGGCGG CACTGCTCGG GGCGCGAAGG
CCGGCAATCG ACCTGACCTC CCTGGCTGAT GTCGTGTGCC GTCTAGGCCG GCTCATGGTC
GAGCATCCGG ACATCGAGGA GGTTGATCTC AACCCCGTTC TCGCGCGCCC CGACGGGTGC
ACGGTCGTCG ACTGGCGAGT TCGGGTGCGT TCTTCGTCCT GA
|
|---|
| Protein sequence | MRLLNHPLSA VFRPRRVALV GASDRPGSAG ALFWENLSGF TGEVLPVNGS GRAVAGVRAY
RSLTEIPGSI DLAVLVVPAS AVAAVVRDAG AKGIPACVVI TSGFAEAGPE GERLQAEVMA
IARAGGVRIV GPNCFGVQNA EVGFNASLSP RLTASAGSLS LVTQSGAYGM ALHSLAQDEN
LRFNKVYATG NKADLTDTEL LDYLDSEGGS GPICFFLESL PDGRAFFEAA RRVTRNRPVI
VCRTGRSTAG SRAACSHTAS LAGQQRVWSA AFAQAGVIVT KSGLEMLDAA RALDGGHHPA
GLRVGIVTNS GGTGVELTDL LADEGLDVPL LSAPLQTKLA ETLPDLASPS NPVDLTTAWQ
RFTELYPFAI EQLVRSGEID AVIAVLLQRS ADEGVATAVA EKVQQLRAEG VTVPVYVCWV
AAHDDRANAA PLRCAGVPVF EWPERTARAV GHAARYGAWL RPEGSWLTLD RRVSVEPGLG
EQATGWLPVG ESAFLLAEHG LPLVPWSLCG SVADAVQVAE SFGYPVVLKA IHADLLHKSD
ADGVRLGLTG PDEVAAAGEF LLKFREGTEL LVQQQHSGVE VIVGGVRDAE FGPVVLVGMG
GVDVEVQDDV VLALAPLLLP EAEAMVRRLR GAAALLGARR PAIDLTSLAD VVCRLGRLMV
EHPDIEEVDL NPVLARPDGC TVVDWRVRVR SSS
|
|---|
| |