| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4771 |
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| Symbol | |
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| ID | 4595373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 77241 |
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| End bp | 80102 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772560 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_919220 |
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| Protein GI | 119714078 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.360251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC CTGCCCCCCT GGACGTCGCC GTCGGCAGCC TGGTCCGCGC CCGAGGTCGC
GAGTGGGTCG TCCTGCCCGG CACCACTCCC GACTTCGTAC TCCTTCAGCC CCTCGGCGGC
GGCAGCGACG ACGTCGTCGG AGTCTTTCCC GACGAGGGAG TCGAACACGC CACCTTTCCC
CCGCCCACCG CCGCCGACCT CGGTGACAGC GCTTCCACTG CCCTGCTGCG CACCGCCCTG
CGCGTCGGCT TCACCGCCGG AGCCGGCCCC TTCCGCTCCC TGGCGGGCAT CAGCGTCAGC
CCGCGCAGCT ACCAGTACGT CCCCCTGCTC ATGGCCCTGA GACAGGAGAC CGTCCGGCTC
CTGATCGCCG ACGACGTCGG CATCGGCAAA ACCATCGAGG CCGGCCTGAT CGCCGCCGAA
CTGCTCGCCC AAGGCACCGT CCGGCGCCTC GCCGTCCTGT GCTCACCGGC ACTCGCCGAG
CAGTGGCAGC GCGAGCTCGC CACCAAGTTC GGCATCGACG CCGCGCTCGT GCTCACCAGC
ACCGTAAAGC GCCTCGAGCG CGGCCTGATG CTCAACGAGT CGCTGTTCGA CCGCTACCCG
CACGTCATCG TCTCCACCGA CTTCATCAAA TCCGCCCGTC GCCGCCACGA CTTCCTTCTC
CGCTGCCCCG AGCTGGTCAT CGTCGACGAA GCCCACAACT GCGTCGCCGG CGCTGGCGTC
GGCCATCGGT CCCGACACCA GCGCTACGAG CTGCTGCGTG ACCTGGCCGC CGATGCGACC
CGCCACCTCG TGATGGCCAC CGCAACCCCG CACTCCGGCG ACGAGGCCGC GTTCACCAAC
CTGGTCGGCC TCTGCAACCC CGAGCTCGCC ACGGCCGACC TCAGCTCCGA GAAGGGCCGC
CGCCTTCTCG CCCAGCACTT CGTGCAACGC CGCCGCGCGG ACATCCGCCA CTACCTCGAC
GAGGACACCC CATTCCCCAA GGACCGCCTG ACCCTCGACG TTCCCTACAC GCTCTCGCCG
GCCTACCGCG ACCTGTTCGA CGATGTTCTC GCCTACGCCC GCGAGCAGGT CCGCGACGGC
GTCGACGGCA CGCGTGGACG CGTCCGATGG TGGTCTGTCC TCGCACTGCT CCGAGCGCTC
GCCTCCAGTC CCCAGGCGGC AGCCGCGACT CTGCGAACGC GCGCAGCCAA CGCCGAGGCC
ACCACCGCTC AGGAGGCCGA TGAACTTGGC CGGGCTGCCG TCCTCGACAG CGCTGACGAC
GAGTCACTCG AAGGGATCGA CACCACGCCC GGCGCACTCA CCGACGACGA GACCAGCGCC
GGTACCGACA CTGCCGAGCG GCGGCGCCTG CTCGGATTCG CTCGGCGGGC CGCCGACCTC
GCCGGGCCGG ACCACGACCG CAAGCTCGCC GCCGTCACCA CCCAGGTCAA GAAACTCCTA
GCGGACGGCT ACAGCCCGAT CGTGTTCTGC CGCTTCATCG ACACCGCCCA CTACGTGGCG
GCTCACCTCA ACACGGCACT CGGCACCAAG AGAAACCCCG TGCACGTCGT CAGCGTCACC
GGCGAGCTCC CACCCGCCGA GAGGGAACGC CGCGTGGGCG AGCTCACCGA ACTCGACGGC
GAACACGTCC TCGTCGCCAC CGACTGCCTC TCCGAAGGTG TCAACCTGCA GGAGCACTTC
TCCGCGGTCG TGCACTACGA CCTGTGCTGG AACCCCACCC GCCACGAGCA GCGCGAAGGA
CGGGTCGACC GCTACCTTCA GCGGAAGGAG GTCGTCCGCG CCGTCACCCT TTACGGCGAG
GACAACGGCA TCGACGGCAT CGTCCTCGAC GTCCTCATCC GCCGCCACCG TGCGATCGCC
AAGGCCACCG GCGTGGCGGT TCCCGTCCCC GGCGACGGCC AAGGCCTCAT CGACGCCCTC
GCCGAGGGCC TGCTGCTACG CCGCCAGGAC TCCCGCGATC AGCTCGTCCT GGACCTCGGA
CTGGACGAGC GCACCCAACA GCTCGAGGAC GCCTGGACCT CTGCGGCCGA GCAGGAGAAG
GTCTCCCGCA CCCGCTACGC CCAGCACGCG ATCAAGCCTG AGGAAGTCGC GGCCGAGGTC
GAGGAGCTCC ACGCCGCGCT GGGAACCCAT GGCGACCTCG AGACCTTCCT CACCGGCACC
CTGCGCGCTC TCGGCTCCAC CCTGACCACC GGGACCGACG CCTTCACCGC CGTCACCGCC
ACCCTGCCCC TCGGCCTGCG CACCGCCCTG CCGGTCGGGA TCCGCGACCC GCTGCCGTTC
CACTCAGAGC CGCCCGCAGG CCGCGGTGAG GCGGTCATCG CCCGCACCGA CCCCACCGTC
CAGGCAATCG CCCGCTACGT GCTCGAGAGC GCACTCGACC CCACCGTGCC AGCCCCGGAG
CGGCCAGCGC GGCGGGCCGG CGTCATGCGC ACCCGCGCCG TGCAGACGCG CACCACGCTC
CTGCTCGTCC GCTTCCGGTT CCAGCTGGAA CTTCCCGCAT CCGACGGGGT CCAGCAACGG
GTCGCGGAGG ACGCCCGAGT CCTTGCCTTC GAGGGCACGC CATCACAAGC CCTCTGGCTC
CCCGACGACC GGGCCGAGGA CCTGCTGTCA GCAACTCCGA CGGCCAACGT CATCGAGGGG
GCCGCCCACG ACGCGATCAG TAAGGTTCTC GACGGACTCT CGGCGCTCAC CCCGCACCTG
GAGTCAGTGG CCGACGAACA TGCGGACAGG CTGCTCGGCG CCCACCGCCG TGCCCGTACC
GGCGCCGGCG CTGCCCGCCG AGGCCTTGCT GTTACTGCAC AACGCCCCGT CGATGTGCTC
AGTGTCCAGC TCTTCTTGCC CGATCTCGGA GGTGCCTCGT GA
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| Protein sequence | MTSPAPLDVA VGSLVRARGR EWVVLPGTTP DFVLLQPLGG GSDDVVGVFP DEGVEHATFP
PPTAADLGDS ASTALLRTAL RVGFTAGAGP FRSLAGISVS PRSYQYVPLL MALRQETVRL
LIADDVGIGK TIEAGLIAAE LLAQGTVRRL AVLCSPALAE QWQRELATKF GIDAALVLTS
TVKRLERGLM LNESLFDRYP HVIVSTDFIK SARRRHDFLL RCPELVIVDE AHNCVAGAGV
GHRSRHQRYE LLRDLAADAT RHLVMATATP HSGDEAAFTN LVGLCNPELA TADLSSEKGR
RLLAQHFVQR RRADIRHYLD EDTPFPKDRL TLDVPYTLSP AYRDLFDDVL AYAREQVRDG
VDGTRGRVRW WSVLALLRAL ASSPQAAAAT LRTRAANAEA TTAQEADELG RAAVLDSADD
ESLEGIDTTP GALTDDETSA GTDTAERRRL LGFARRAADL AGPDHDRKLA AVTTQVKKLL
ADGYSPIVFC RFIDTAHYVA AHLNTALGTK RNPVHVVSVT GELPPAERER RVGELTELDG
EHVLVATDCL SEGVNLQEHF SAVVHYDLCW NPTRHEQREG RVDRYLQRKE VVRAVTLYGE
DNGIDGIVLD VLIRRHRAIA KATGVAVPVP GDGQGLIDAL AEGLLLRRQD SRDQLVLDLG
LDERTQQLED AWTSAAEQEK VSRTRYAQHA IKPEEVAAEV EELHAALGTH GDLETFLTGT
LRALGSTLTT GTDAFTAVTA TLPLGLRTAL PVGIRDPLPF HSEPPAGRGE AVIARTDPTV
QAIARYVLES ALDPTVPAPE RPARRAGVMR TRAVQTRTTL LLVRFRFQLE LPASDGVQQR
VAEDARVLAF EGTPSQALWL PDDRAEDLLS ATPTANVIEG AAHDAISKVL DGLSALTPHL
ESVADEHADR LLGAHRRART GAGAARRGLA VTAQRPVDVL SVQLFLPDLG GAS
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