Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4760 |
Symbol | |
ID | 4595222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 61225 |
End bp | 62826 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639772549 |
Product | SMC domain-containing protein |
Protein accession | YP_919209 |
Protein GI | 119714067 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAAGA AGATCGCCAT ACGCAACTAT CGGACCTTCA AGTCATTCGA GCTCGAGTTT GCTCCCGACC TCAACATCGT GGTTGGCGAC AACGATGCCG GCAAGTCCAC CCTTCTTGAA GCCATTGGGA TAGCGCTGAC GCTGCGCCTC GGAGGCCGCA GCCTTCAGAG CGAGCTCTCA CCATTCCTGT TCAACCTTGA AACGACCGAG GAGTACATAG CGGCGCTAAC GGCAGGGGCC ACTCCTGACC CTCCTGAGAT CCTCATCGAG CTGTTCCTCG ACTCGGCCTC CGCGCCGGCA ATTCTCAGAG GCTCCAACAA CCTCGATGGA ACGGACGACC CCGGCGTCCG CGTGCGGATC GCGTTGAACC CGGACTACCA CGGCGAGTAC ACCGAGTTCG TCAAGGACCC ATCCCAGGTT CGGCTAGTGC CCACGGAGTA CTACAACGTC CAGTGGCTGG GATTCAGCGG AAACGCGATC ACCTTCCGCT CGATACCTGC CGTGGCCTCG CTCATCGACG CGACGACGAT TCGTCTGGCG AGCGGAGCCG ACTACCACCT GCAAGGAATC ATCAACAACC ACCTCACCGA CGGCGAGCGG GTCGAGTTGA CTCGCGCCTA CCGCAGTCTC CGAGAAGAGT TCTCCAGCAA CCCTTCGATC GAGGCCATCA ACAAGTCTCT CGAGGGACAG CCCGGAGACG TTAGTGATCG CACTCTGTCG CTATCGATCG ATGTCTCCCA GCGGTCGAGT TGGGAGAGCA ACCTGGTCCC TCACCTCGAC GACTTGCCAT TCGGCTTCGT CGGCAAGGGC GAGCAAAGCA GCCTGAAAGT GCTGCTCGCG CTCAACCGGA AGGTCCAAGA TGCCCACATC GTGCTCGTGG AGGAACCCGA AAACCACCTC TCCTTCACCA ACCTCAACCA ACTGGTCGCA AAAATCAGCG AAAAGTGCAA GGACAAGCAG GTCTTCATCA CCACGCACAG TTCATACGTG CTCAACAAGC TCGGCCTCGA CAGCCTCTTC CTGCTCACAC CTAGGACAGG GCTTCGCCTG ACTGACCTGC CCGCAAGCAC TCTGGACTAC TTCAAGAAGC TCTCCGGCTA CGACACCTTG CGGTTGGTTC TCGCCAAGAA GGTGATTCTC GTCGAGGGCC CGTCTGACGA GCTGGTTGTC CAGCGTGCCT ACCAGGACAA GCACGGCAAT CTGCCGATTC ACGACGGGGT CGACGTCATC AACGTGCGAG GACTCTCGTT CAAGCGATTC CTGGACATCG CCAAGCCCCT CGGCATCGAG GTGCACGTCG TCACGGACAA CGACGGAGCC GACCCCGCGG TTGTCGAGGC CGGCTACAGC GACTACACGG CCGTGCCGCA CATTCACGTG CACGTTGGGC AAGACCCCAC CCGTAAGACC CTCGAGCCAC AGCTGGTTGG CGCCAACGGT CGTGACACCA TCAACGCGAT TTTGGGAACC CGTTACACCA CCGACGTTGA CCTTCTGAAG CACATGACCG CCAGTGCAAA CAAGACAACC TGCGCACTGA AGATCTTTGA ACACCTCGAC ACGATCACGA TGCCGGGGTA CATCGCAGAT GCCGTCGCCT AA
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Protein sequence | MLKKIAIRNY RTFKSFELEF APDLNIVVGD NDAGKSTLLE AIGIALTLRL GGRSLQSELS PFLFNLETTE EYIAALTAGA TPDPPEILIE LFLDSASAPA ILRGSNNLDG TDDPGVRVRI ALNPDYHGEY TEFVKDPSQV RLVPTEYYNV QWLGFSGNAI TFRSIPAVAS LIDATTIRLA SGADYHLQGI INNHLTDGER VELTRAYRSL REEFSSNPSI EAINKSLEGQ PGDVSDRTLS LSIDVSQRSS WESNLVPHLD DLPFGFVGKG EQSSLKVLLA LNRKVQDAHI VLVEEPENHL SFTNLNQLVA KISEKCKDKQ VFITTHSSYV LNKLGLDSLF LLTPRTGLRL TDLPASTLDY FKKLSGYDTL RLVLAKKVIL VEGPSDELVV QRAYQDKHGN LPIHDGVDVI NVRGLSFKRF LDIAKPLGIE VHVVTDNDGA DPAVVEAGYS DYTAVPHIHV HVGQDPTRKT LEPQLVGANG RDTINAILGT RYTTDVDLLK HMTASANKTT CALKIFEHLD TITMPGYIAD AVA
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