| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5107 |
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| Symbol | |
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| ID | 4583668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 619906 |
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| End bp | 621912 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639772410 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_918863 |
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| Protein GI | 119387829 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00931124 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGT TTTCCAACGA AACCACCTTT CTTCTTGGCC GGCTGAACTG GGACGCGATC
CCCAAGGAGC CGATCGTCTG GGCGACCTTC GTCGTCGTCG CCATCGGCGG CATCGCGGCC
CTGGCGGCGC TGACGAAATA CCGGCTTTGG GGCTGGCTCT GGCGCGAGTG GTTCACCTCG
GTCGACCACA AGAAGATCGG CATCATGTAT ATCGTGCTGG CGCTGATCAT GTTCGTGCGC
GGCTTTGCCG ATGCGATCAT GATGCGGCTG CAGCAGGTCT GGGCCTTCGG CGGCTCCGAG
GGCTACCTGA ACAGCCACCA CTACGACCAG ATCTTCACGG CGCATGGCGT CATCATGATC
TTCTTCGTGG CTATGCCCTT CATCACCGGG CTGATGAACT ATGTCGTGCC GCTGCAGATC
GGCGCGCGCG ACGTGTCCTT TCCTTTCCTC AACAACTTTT CGTTCTGGAT GACGGTGGGC
GGCGCGGTGA TCACCATGGC CTCGCTGTTC CTGGGCGAGT TCGCACAGAC CGGCTGGCTG
GCCTTTCCGC CGCTTTCGGG CATCGGCTAC AGCCCCTGGG TCGGGGTGGA CTATTACATC
TGGGGCTTGC AGGTCGCGGG CGTCGGCACC ACGCTGTCGG GGATCAACCT GCTGGTGACG
ATCCTGAAGA TGCGTGCGCC GGGCATGACG ATGATGCGGA TGCCGATCTT CACCTGGACC
TCGTTCTGCG CCAACATCCT GATCGTCGCC TCGTTCCCGG TGCTGACCAT GACGCTGATC
CTGCTGACGC TGGATCGCTA TGTGGGCACC AACTTCTTCA CCAACGACCT TGGCGGCAAT
CCGATGATGT ATATCAACCT CATCTGGATC TGGGGCCACC CCGAGGTCTA TATCCTGATC
CTGCCGCTGT TCGGCGTGTT TTCCGAAGTC ACCTCGACCT TCTCGGGCAA GCGGCTGTTC
GGCTATTCCT CGATGGTCTA TGCCACGGTC TGCATCACGG TGCTCAGCTA CCTGGTCTGG
CTGCATCACT TCTTCACCAT GGGCTCGGGC GCATCGGTGA ACTCGTTCTT CGGGATCACC
ACGATGATCA TCTCGATCCC GACCGGGGCC AAGCTCTTCA ACTGGCTCTT CACCATGTAT
CGCGGTCGCA TCCGCTATGA GCTGCCGATG ATGTGGACCA TCGCCTTCAT GCTGACCTTC
GTGATCGGCG GCATGACGGG CGTGCTGCTG GCCGTGCCGC CGGCGGATTT CGTGCTGCAC
AATTCGCTGT TCCTGATCGC GCATTTCCAC AACGTCATCA TCGGCGGCGT GCTGTTCGGC
CTGTTCGCCG CCATCAACTT CTGGTGGCCC AAGGCATTCG GGTTCAAGCT GGACGTGTTC
TGGGGCAAGG TCTCGTTCTG GTTCTGGGTC GTCGGCTTCT GGGCCGCCTT CATGCCGCTG
TATATCCTGG GGCTGATGGG CGTGACCCGG CGGCTGCGCG TCTTCGACGA TCCCGACCTG
CGGATCTGGT TCGCCATCGC GGCCTTCGGC GCGGTGCTGA TCGCCTGCGG CATCGCGGCC
ATGTTCGTGC AGTTTGGCGT CTCGATCCTG CGCCGCGACC GGCCGGAGTA CCGCGACGTC
AGCGGCGATC CCTGGGACGG GCGGACGCTG GAATGGGCGA CCTCGTCGCC GCCGCCGGCC
TATAACTTCG CCTTCAACCC GATCTCGCAC GGGCTGGATA CCTGGTGGGA GATGAAGCAG
CAGGGCGCCA CCCGCCCGAC CGGCGGCTAT ATGCCGATCC ACATGCCGAA GAACACCGGC
ACGGGCGTGA TCCTGGCGGC GCTGGCCACG GTCTGCGGCA TGGCGCTGGT CTGGTATGTC
TGGTGGCTGG CGGCCCTGAG CTTCCTCGGC ATCATCGCGG TCTCGATCGC GCATACCTTC
AACTACAACC GCGACTATTA CATCCCCGTC TCGGAAATCG AGGCGACCGA GGATGCCCGG
ACGCGCCAGC TTGCGCAGGG GGTTTGA
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| Protein sequence | MATFSNETTF LLGRLNWDAI PKEPIVWATF VVVAIGGIAA LAALTKYRLW GWLWREWFTS
VDHKKIGIMY IVLALIMFVR GFADAIMMRL QQVWAFGGSE GYLNSHHYDQ IFTAHGVIMI
FFVAMPFITG LMNYVVPLQI GARDVSFPFL NNFSFWMTVG GAVITMASLF LGEFAQTGWL
AFPPLSGIGY SPWVGVDYYI WGLQVAGVGT TLSGINLLVT ILKMRAPGMT MMRMPIFTWT
SFCANILIVA SFPVLTMTLI LLTLDRYVGT NFFTNDLGGN PMMYINLIWI WGHPEVYILI
LPLFGVFSEV TSTFSGKRLF GYSSMVYATV CITVLSYLVW LHHFFTMGSG ASVNSFFGIT
TMIISIPTGA KLFNWLFTMY RGRIRYELPM MWTIAFMLTF VIGGMTGVLL AVPPADFVLH
NSLFLIAHFH NVIIGGVLFG LFAAINFWWP KAFGFKLDVF WGKVSFWFWV VGFWAAFMPL
YILGLMGVTR RLRVFDDPDL RIWFAIAAFG AVLIACGIAA MFVQFGVSIL RRDRPEYRDV
SGDPWDGRTL EWATSSPPPA YNFAFNPISH GLDTWWEMKQ QGATRPTGGY MPIHMPKNTG
TGVILAALAT VCGMALVWYV WWLAALSFLG IIAVSIAHTF NYNRDYYIPV SEIEATEDAR
TRQLAQGV
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