| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5093 |
|---|
| Symbol | |
|---|
| ID | 4583654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 605467 |
|---|
| End bp | 605865 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639772396 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_918849 |
|---|
| Protein GI | 119387815 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.552883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCATG AGGTTCTGCA TCCCAGGAAC TGGAAGGCGA CGCCGGGCTA TTCGAACGGC
ATCGCCGCGA CCGGGCGGAT GGTGTTCACC GGCGGCATGA TCGGCTGGAA CGACCAGCAG
GAGTTCGAAA CCGACGATTT CGTCGAACAG GTGCGCGTGA CGCTGAAATC CATCGTCGCC
GTGCTGGCCG AGGCCGGCGC GCGGCCCGAA CATCTGGTGC GCCTGACCTG GTATGTCACC
GACAAGCGCG AATATCTGGG TGCGCTCAAG GGGATCGGAC AGGCCTACAA GGACATCATC
GGCCGGCACT ATCCGGCCAT GGCGCTGGTG CAGGTCGTCG CATTGGTCGA GGACCGCGCC
AAGGTCGAGA TCGAGGCAAC CGCCGTGATC CCCGCCTGA
|
|---|
| Protein sequence | MVHEVLHPRN WKATPGYSNG IAATGRMVFT GGMIGWNDQQ EFETDDFVEQ VRVTLKSIVA
VLAEAGARPE HLVRLTWYVT DKREYLGALK GIGQAYKDII GRHYPAMALV QVVALVEDRA
KVEIEATAVI PA
|
|---|
| |