| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5084 |
|---|
| Symbol | |
|---|
| ID | 4583645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 596730 |
|---|
| End bp | 597665 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639772387 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_918840 |
|---|
| Protein GI | 119387806 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.599555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACC TTTGCATCGG TGAGCCGCTG GTCGAGTTCA CCGCGCGCCG CGATGCGCCT
TCGACCTTCG ACCGGCGCGC GGGCGGCGAC ACGCTGAACA GTGCCATCTA TCTGGCGCGG
CTCATGCCGG CCGGCTCGGT CGGCTATCTG TCGCAACTCG GCGACGACGC GATGAGCCGC
TGGTTGCGCG GCGTCATGGC CGAGGAGGGC GTGGCCGATC TTTGCGCCAC CGAACCGGGC
GGCCGCCCCG GGCTCAGCTT CATCTCGACC GACATGCGGG GCGAGCGCAG CTTTCTTTAC
TGGCGCGAAC AGGCGCCGGC GCGGCGCATG TTCCAGAATG GCGACGAGGC GCTGCATGCC
GTGGCCGAGG CCGGGACGGT GCTGTTGTCC GGCGTCACGC TGGCGATCCT GCTGCCAGAA
AGCCGCGAAC GGCTGTTCGC GGCGCTGGAA CGGCGGTTGG CGGCGGGGGG CCGGATCGTG
CTGGACACGA ATTACCGCCC CGCCCTTTGG CCCGATGCCG CTGTTGCGCG CCAGGTGATC
GCCCGCGCGG CGGCGCTGGC GACACTGATC CTGCCCTCGC TGGACGATCT GGCCGGCTGC
TTTGGGGTCG CGGACCCGGC CGGGGCGATG GCGCTGCTGG CCGGGCTGGG CGGAGCCGAG
ATCGTGCTGA CCACCGGAGG GGACGAGGTG CTGCACCGCG CGCCCGGCCG CACCCGGATC
GAGACCCATC CGCTGCCGCC GAAGATCGCC GCGCTCGATA CCACCGGCGC CGGCGACAGC
TTCAATGCCG GCTGGCTGGT CGCGTCCGAG GCAGGGTTGT CGCCGGTCGA GGCCGTGGCC
CTTGCTGCCC GCCTGGCCTC GGTCGTCGTG GCCCATCCCG GCGCGGTCAT CCCGCGCAGC
GCCATGCCCG ACCTGGGCCT GAAGGTGGCG ACGTGA
|
|---|
| Protein sequence | MRYLCIGEPL VEFTARRDAP STFDRRAGGD TLNSAIYLAR LMPAGSVGYL SQLGDDAMSR
WLRGVMAEEG VADLCATEPG GRPGLSFIST DMRGERSFLY WREQAPARRM FQNGDEALHA
VAEAGTVLLS GVTLAILLPE SRERLFAALE RRLAAGGRIV LDTNYRPALW PDAAVARQVI
ARAAALATLI LPSLDDLAGC FGVADPAGAM ALLAGLGGAE IVLTTGGDEV LHRAPGRTRI
ETHPLPPKIA ALDTTGAGDS FNAGWLVASE AGLSPVEAVA LAARLASVVV AHPGAVIPRS
AMPDLGLKVA T
|
|---|
| |