| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5077 |
|---|
| Symbol | |
|---|
| ID | 4583638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 590829 |
|---|
| End bp | 591707 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639772380 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_918833 |
|---|
| Protein GI | 119387799 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0300585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.474351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGG ACCCGCAGGT GCTGGACTTC ATCGCCCGGA CCGAGGCCGC CTATCCGCCC
GAGGCGAACG GCGCCAGCGC CGCCGACAAC CGGCGCTTCT ACGATGCGAT GTGCGCCGTC
TTTCGCGCCC CGCGCCCGCC CGGCCTGCCG GTCCAGGATC GCCGGATCGG CGGCGTGCCC
TGCCGCATCT ACGGTGCGGA TATCCCGGTG GCGGTCGTCT ATGTGCATGG CGGCGGTTTC
GTGGTCGGCG GGCTCGACAG CCATGACGAT GTCTGCGCCG AGATCGCCGA CGCCACCGGC
TTGCAGGTCG TCGCGGTCGA TTATCGGCTG GCGCCCGAGC ATCGCTGGCC GGCGCAGATT
GCGGATGTGC AGGCGGTCTG GGATGCGCTG GACCGCCCCG CCGTGATCGC GGGCGACAGC
GCGGGCGGGC TGCTGGCCGC CGCGCTTTGC CTGTCGCGGC GCGGCGCGCG GCAGCCGCTG
GGGCAGGTGC TGGTCTATCC CGGCCTTGGC GGCGACGGCA GCGCGCCCTC GTATCGCGAG
AATGCCGAGG CGCCCTTGCT GCGGACCGAG GATCTGGCCG GCTATCACGC CGCGCTGCAT
GGCGAAGGCC CCGTCGATCC GCTGGCGCAT CCCTTGCAGG CTGACAGCCT TGCCGGGCTG
GCGCCGGCAT TCGTCGTCAC CGCCGATGTC GATCCGCTGC GCGACGACGG GCGCGACTAT
GTGCGGCGGC TGCGGGCCGA GGGCGTCGCG GCGCATTGGC GCAACGAACC GGAGCTGCCT
CACGGCTATC TGCGCGCCCG CCGCCACAGC GACCGCGCAC GGCGCAGTTT CCAGGCGATC
CTGGCAGCGA TCCAGCGGTT CGCCGGCCCG CCGCGTTGA
|
|---|
| Protein sequence | MITDPQVLDF IARTEAAYPP EANGASAADN RRFYDAMCAV FRAPRPPGLP VQDRRIGGVP
CRIYGADIPV AVVYVHGGGF VVGGLDSHDD VCAEIADATG LQVVAVDYRL APEHRWPAQI
ADVQAVWDAL DRPAVIAGDS AGGLLAAALC LSRRGARQPL GQVLVYPGLG GDGSAPSYRE
NAEAPLLRTE DLAGYHAALH GEGPVDPLAH PLQADSLAGL APAFVVTADV DPLRDDGRDY
VRRLRAEGVA AHWRNEPELP HGYLRARRHS DRARRSFQAI LAAIQRFAGP PR
|
|---|
| |