| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5069 |
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| Symbol | |
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| ID | 4583630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 581257 |
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| End bp | 582414 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772372 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_918825 |
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| Protein GI | 119387791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGGG ATGAACCGCG CGACCGCACC ATCGCGGCGG CCAACGGCGT GGGCGGCCGC
GATCCCTTTG GCGCCATCGT GCCACCGATC TATCTCAGCA CCAGCTATGC CTTTGCCGGC
TTCGACCGGA CGCGCGGCTA TGACTATACC CGCGCCGGCA ATCCCAGCCG CGACCTGCTG
GCCGAGACGC TGGCCGGGCT GGAGCATGGC GCGGGCGCCG TCGTCACCTC GTCGGGCATG
GCGGCGCTGG ACCTGCTGCT TGCGCAGGTG CTGCCGGGCG GGCTGATCGT CGCGCCGCAT
GACTGCTATG GCGGCACGCA AAGGCTGCTG ACGGCGCGGC GCGACCGCGG CGCCTTTCGG
CTGGCGCTGG TCGATCCTGG CGATCCGGCC GCCATGACCG CGGCGCTGGC CGAGCGCCCG
GCGCTTCTGC TGATCGAGAC GCCCAGCAAC CCGCTGATGC GGGTGACGGA CATCGCTGCG
CTGGCAGTGC GGGCGCACGA GGCCGGGGCA AGGGTGGCGG TGGACAACAC CTTCCTGTCG
CCCGCCTTGC AGCAACCCTT GCTGCTTGGC GCGGATTTCG TGATCCATTC CACGACCAAA
TACCTCAACG GCCATTCCGA CGTGCTGGGT GGCGCCGTGA TTGCCGCGCG AGCCGAGGAT
GCCGAGGCGC TGGCGGAATG GGCCAACATC ACCGGCAGCG TCGGCTCGCC CTTCGATGCC
TTCCTGACCC TGCGCGGCAT CCGCACGCTT TTCGCCCGTA TCGAGCAACA GCAGGCCAGC
GCCATGGTGG TGGCCGAGTT CCTGCGCGAC CGGCCCGAGG TGACGGCGGT GCATTATCCC
GGCCTGTCCG GGCATCCCGG CCATGCCCTT GCCGCGCGCC AGCAGCACGG CTTCGGCGCC
ATGCTGAGTT TCGAATTGCA AGGCGGCCTG CCCGCCGTGC GCCGCCTCGT CGAGGCGGTG
CGGGTCTTCA CCCTGGCGGA TTCGCTGGGC GGGGTGGAAA GCCTGATCGC CCATCCAGCG
ACCATGACCC ATGTCAGCAT GGGCGCCGAG GCGCGGCACC GCGCCGGGAT CGGCGATGGG
CTGCTGCGCC TTTCGGTCGG GCTCGAGGAT CGGCGCGACC TGCTTGATGG GCTCGGCGCC
GGTCTGGCCG CCCTCTGA
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| Protein sequence | MAGDEPRDRT IAAANGVGGR DPFGAIVPPI YLSTSYAFAG FDRTRGYDYT RAGNPSRDLL
AETLAGLEHG AGAVVTSSGM AALDLLLAQV LPGGLIVAPH DCYGGTQRLL TARRDRGAFR
LALVDPGDPA AMTAALAERP ALLLIETPSN PLMRVTDIAA LAVRAHEAGA RVAVDNTFLS
PALQQPLLLG ADFVIHSTTK YLNGHSDVLG GAVIAARAED AEALAEWANI TGSVGSPFDA
FLTLRGIRTL FARIEQQQAS AMVVAEFLRD RPEVTAVHYP GLSGHPGHAL AARQQHGFGA
MLSFELQGGL PAVRRLVEAV RVFTLADSLG GVESLIAHPA TMTHVSMGAE ARHRAGIGDG
LLRLSVGLED RRDLLDGLGA GLAAL
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