Gene Pden_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5040 
Symbol 
ID4583601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp552932 
End bp554020 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID639772343 
Productglycosyl transferase, group 1 
Protein accessionYP_918796 
Protein GI119387762 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTGG GCGGCAGCCT GATGCCCTTC TGCCGCTTCC GCCGCGCCCT GATCGAAAGG 
CTGGTGCGCG ATCACGACTG TCGTGTCATC TGCGCCTATT GGGGGGATCG CGCGGACGGG
TTCTTCGCTC CCTTCGATCT GGAGGGGGTC GTCTGGCAGG ATCTGGGCGG CGATCACGCC
AGCCCCCCCG GCATTGCCGA TCTGCCCCCG CTGGCCCGCC TGTTCCGCAC CATCCGCCGC
CACAGGCCGG ATGTGATCTG CTGCTTCAAC GCGAAGCCGA TCGCTCTGGG CCCGCGCATC
GCCCGTCTGG CCCGCCCCGG TGCAAGGATC GTCGCGCTCA TGGAGGGCCT CGGCTCGGCC
CTGTCCTTCC TGCTGGACGC ATCCGGCCCG AAGCGGCGCG TTTTCCGCAC GCTGACCCGG
CCGGTGGATC GCTGGGTGTT GCTGAACGAC CGCGATGCCG GGGTGATCCT GGACCTTCAC
CCGCAGCGGC GGGAAAGCAT CTCCACCCTG CCCGGCATCG GCATCGACCC GGATCATTTC
AGCCCCGGCC CCGATCTGCT TGCCCAAAGG CGGCTGATCT TCGTCGGCCG CCTGGTGCCG
GAAAAGGGGA TCGACATGTT CCTGGCACTG GCCCGGCATC TGCGCGGCAG CGACTGGCGG
CTGGCCGCAG CGGGCCTGCC CACATCCCAC GGCATCGCCC CGGCCGAGAT CGAAAGCTGG
CTGCGCGAGG GCCTGCTGGA ATCCTGCGCA CCCGTGCACG ACATGGCCGC CTTCTACCGC
CGCGCCTCGG TCCTGGTCTT TCCCTCGCGC TACGAAGAGG GCCTGCCCGC CGTGATCATG
GAGGCGCAGG CGAGCGGCCT GCCCTGCCTC GTCCGCGACA CCCCCGTCCT GCGCGGCACG
ATCCGCCACG GCGAAACGGG CTTTCTCGTC TCGGGCGAGG ATCCTTCCGA TTGGGCCGCG
GCGCTGAAGT GGCTGGAGGA ACCGGCCACG TTCGCAGCCT TCTCGGCTGC CGCGCGGCGC
CATGCGGTGG AACAGTTCGA TCAGGACCGC ATCAATGCCC GGCTGATCGG GCTGCTGCTT
CAGGCATAG
 
Protein sequence
MFVGGSLMPF CRFRRALIER LVRDHDCRVI CAYWGDRADG FFAPFDLEGV VWQDLGGDHA 
SPPGIADLPP LARLFRTIRR HRPDVICCFN AKPIALGPRI ARLARPGARI VALMEGLGSA
LSFLLDASGP KRRVFRTLTR PVDRWVLLND RDAGVILDLH PQRRESISTL PGIGIDPDHF
SPGPDLLAQR RLIFVGRLVP EKGIDMFLAL ARHLRGSDWR LAAAGLPTSH GIAPAEIESW
LREGLLESCA PVHDMAAFYR RASVLVFPSR YEEGLPAVIM EAQASGLPCL VRDTPVLRGT
IRHGETGFLV SGEDPSDWAA ALKWLEEPAT FAAFSAAARR HAVEQFDQDR INARLIGLLL
QA