Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4997 |
Symbol | |
ID | 4583558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 509578 |
End bp | 510285 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772300 |
Product | ABC transporter related |
Protein accession | YP_918753 |
Protein GI | 119387719 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.151213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGG TGCTTCGTTA CGAGAACCTC TCGGCCTTCT ACGGTGCCAG CCAGATCCTG CACGGGCTCA GCTTCGAGGT GCCGGCCGCC TCGGTGGTGT GCCTTCTGGG CCTGAACGGC ATGGGCAAGA CCACGACGCT GCGCGCGACC ATGGGGCTGG TGGACCGGAC CGAGGGGCGG ATCACGCTGA ACGGCCGGGA ACTGGCGGGC CCGACCTTTC GCCGCGCCCA GATGGGCGTG ACGCTGGTGC CCGAGGATCG CAAGGTCTTT GCCAATCTGA CGGTCGAGGA AAACCTGGAA GTCGCGCGCC GGCCGACCGG CTCCGGCCGG GACTTCAGCA TCGCCGAGGC GGTCGAGATC TTTCCTCGCC TGGGCGAGCG GATGGGCCAG AAGGCCGGCA CGATGAGCGG GGGCGAGCAG CAGATGCTGG TCGTGGCCCG CGCCATGCTG GCCAACCCGG CCTACATGAT GCTGGACGAG CCGACCGAGG GCCTGTCGCC CAGCTATGTC GGCGCCATCG CCCAATCCAT CGAAGAGGCG CGCAAGCGCG GCATCGGCGT CATCCTCGTC GAGCAGAGCA TCCCGCTGGC GCTTTCGGTC GGGGATGCCT TCCATGTCGT CGAGAACGGC CAGATCACCC GCAGCTTCGC CCGCGACGAG GCGCTGGCGG ATCGCGAGGG GCTGGAACGG ATGCTGACGG TCGAATGA
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Protein sequence | MNAVLRYENL SAFYGASQIL HGLSFEVPAA SVVCLLGLNG MGKTTTLRAT MGLVDRTEGR ITLNGRELAG PTFRRAQMGV TLVPEDRKVF ANLTVEENLE VARRPTGSGR DFSIAEAVEI FPRLGERMGQ KAGTMSGGEQ QMLVVARAML ANPAYMMLDE PTEGLSPSYV GAIAQSIEEA RKRGIGVILV EQSIPLALSV GDAFHVVENG QITRSFARDE ALADREGLER MLTVE
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