Gene Pden_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4997 
Symbol 
ID4583558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp509578 
End bp510285 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID639772300 
ProductABC transporter related 
Protein accessionYP_918753 
Protein GI119387719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG TGCTTCGTTA CGAGAACCTC TCGGCCTTCT ACGGTGCCAG CCAGATCCTG 
CACGGGCTCA GCTTCGAGGT GCCGGCCGCC TCGGTGGTGT GCCTTCTGGG CCTGAACGGC
ATGGGCAAGA CCACGACGCT GCGCGCGACC ATGGGGCTGG TGGACCGGAC CGAGGGGCGG
ATCACGCTGA ACGGCCGGGA ACTGGCGGGC CCGACCTTTC GCCGCGCCCA GATGGGCGTG
ACGCTGGTGC CCGAGGATCG CAAGGTCTTT GCCAATCTGA CGGTCGAGGA AAACCTGGAA
GTCGCGCGCC GGCCGACCGG CTCCGGCCGG GACTTCAGCA TCGCCGAGGC GGTCGAGATC
TTTCCTCGCC TGGGCGAGCG GATGGGCCAG AAGGCCGGCA CGATGAGCGG GGGCGAGCAG
CAGATGCTGG TCGTGGCCCG CGCCATGCTG GCCAACCCGG CCTACATGAT GCTGGACGAG
CCGACCGAGG GCCTGTCGCC CAGCTATGTC GGCGCCATCG CCCAATCCAT CGAAGAGGCG
CGCAAGCGCG GCATCGGCGT CATCCTCGTC GAGCAGAGCA TCCCGCTGGC GCTTTCGGTC
GGGGATGCCT TCCATGTCGT CGAGAACGGC CAGATCACCC GCAGCTTCGC CCGCGACGAG
GCGCTGGCGG ATCGCGAGGG GCTGGAACGG ATGCTGACGG TCGAATGA
 
Protein sequence
MNAVLRYENL SAFYGASQIL HGLSFEVPAA SVVCLLGLNG MGKTTTLRAT MGLVDRTEGR 
ITLNGRELAG PTFRRAQMGV TLVPEDRKVF ANLTVEENLE VARRPTGSGR DFSIAEAVEI
FPRLGERMGQ KAGTMSGGEQ QMLVVARAML ANPAYMMLDE PTEGLSPSYV GAIAQSIEEA
RKRGIGVILV EQSIPLALSV GDAFHVVENG QITRSFARDE ALADREGLER MLTVE