Gene Pden_4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4996 
Symbol 
ID4583557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp507372 
End bp509489 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content69% 
IMG OID639772299 
ProductCoA-binding domain-containing protein 
Protein accessionYP_918752 
Protein GI119387718 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG AAATCGAATC CAAGGAACTG CTGGCGCGCT ACGGCATCGA GACCACGCTG 
CCGGAACTGG CGACCTCGCC GGACGATGCC CATGCCATCG TCTCGCGCAT CGGTGCCCCC
TGCGCGCTGA AGGTGGTCTC GCCCGACATC GTCCACAAGG TCGATGCCGG CGGCGTGCGC
CTATCGGTGG CGGCGGACGG GGCAGGGGAT GCCTGGCGCT CGATCATGGA TGCCTGCCGC
GCCTCGCATC CCTCGGCCCA CATCGAGGGC GTGCTGGTCG AAGAGATGGT GCCTGCCGGG
CTCGAGGTCT TCATCGGCGG GCGGATCGAC CCGGATTACG GGCCTGTGGT GCTGTTCGGC
GCCGGCGGCA GCGGGGTCGA ACAGCGCGGC AAGCCCGTCG CAGCGCTGGC GCCGCTGACC
GAGGCGCAAG GCCGGGCGAT GGTCGATGCG GCCTTTCCCG CCCCCTTCGC CGGCGGGGAT
GCGGCCGGAC GCGCCGCGTT GACCCGCTGC CTGATGGCGG TCGGCGGACC GGACGGCATG
TTGCTGAACG AGGAGATCGC CGAACTCGAC ATCAACCCGA TCATCCTTTG CGGCGCGCGG
GCGGTCGCGG TCGACGCGGT CGCGGGCGGC GTGCGTCCCG CCACCACCCC GCGCGGTGAT
GCGGAAACCG CGGCCGCGCT CGACGCCCGC CGTGCCAAGC TGGCGGGAAT GGGGGCGCTG
TTCAATCCCG GGGCCATCGC CTTTGTCGGC GCCTCGACCT CGGCCGACAA GCTGGGCCAT
CACATGATCC GCAACCTCGT GGATTTCGGC TTCACCGGCC CGATCTATCC GATCCACCCC
AGCGCCGACG AGATCTGCGG CCTCAAGGCC TATCCGACGA TCACCGATGC GCCGGACGGG
ATCGACCGCG CGCTGGTCGC CGTCGCCAGC CATCGCGTGC CCGACGTGCT GGCCGAATGC
CGCGCCAAGG GGGTCAAGCT GGCGCAGGTG CTGACGGCGG GCTTCGCCGA GTTTTCCAGC
GACAGCGCCG ATCTGGAGCG CCGGATGCTG GAGCAGGTCG CGGACGGGGC GATGCGCATG
GTCGGGCCGA ACTGCATCGG CACCTTCTCG GCCGCCTCGC GCATGGCGGT CGGGGCGGCG
CGCTACAACC CGACCGAGGG CGGGGGCATC ACCTTCTTTT CCCAAAGCGG CACCTTTGCC
GGCGACGTGG TGCGCCGCGC GCAGGTCTGG GGCCTGCCGC TGGGACGGGC GCTGTCCTGC
GGCAACTGCT CGGACGTGGA CATGGTCGAT CTGCTGCTGC AGGCCGAGCA GGACCCCGAG
ACCGAGATCA TCGCCTTCTA CATGGAATCG CTGCGCGATC CGGGGCTGTT CTTCCGCGCC
GCCGCCGCGA TGGCCAAGCC CGTGGTGATC CTGCGCGGAG CGCAGACCGA GCAGGGCCAG
GTCGCGGCCT CCAGCCATAC GGCGGCGATG GCGACGGACG GCCTGCTGTG GGACGCGGCG
CTGGCGCAAT CGGGGGTGAT CCAGGTGTCC AATGTCGACG ACCTGATGGA CACGCTGCTG
GCGCTGGCCG CGCATGGCCG TGGCCCGGGC GAGCGGCTGG CGATCTTCGG CTCGGGCGGC
GGGGTCAGCG TCACCGCGTC GGACGCGGCG GCACGCGCGG GGCTGGTCGT GCCCGCGCTG
GATCCGGCGA CCGAGGAAGG GCTGAGGCGC TTCGGCATTC CCGGCACCAG CGTCGCCAAC
CCCATCGACA TCCCGGTCTG GGGCCTGCGC GACGGCGACC GCTATATCTT CGAGGAGATC
ATCAACCTGC TCAAGGACTC GCCGGTCATC GACCGGTTGG TGGTCTTCGT CGAGATGGGC
TGGGTGCTCG ACTTCATGGA AAGCGACGAG GCGGGGCTGG TCGCGCTGGA ACGGATCTGC
GATTCGATCG CCCGCGCGCG CCCCGACGGC GCGGCCATGT CGCTGGCATT GCGCAGCTCG
GGCGACAAAT ACCAGGACGA TTTCGTCCGC GACCAGCGCA GGAAGTTCCT GAAACGGGGC
ATATCGGTAT ATCAATCGAC ATCGCGGGCC GTTCGTGCTC AGGCAAGACT CATTCACGGC
ATGAGGGTAT TGAATTGA
 
Protein sequence
MRTEIESKEL LARYGIETTL PELATSPDDA HAIVSRIGAP CALKVVSPDI VHKVDAGGVR 
LSVAADGAGD AWRSIMDACR ASHPSAHIEG VLVEEMVPAG LEVFIGGRID PDYGPVVLFG
AGGSGVEQRG KPVAALAPLT EAQGRAMVDA AFPAPFAGGD AAGRAALTRC LMAVGGPDGM
LLNEEIAELD INPIILCGAR AVAVDAVAGG VRPATTPRGD AETAAALDAR RAKLAGMGAL
FNPGAIAFVG ASTSADKLGH HMIRNLVDFG FTGPIYPIHP SADEICGLKA YPTITDAPDG
IDRALVAVAS HRVPDVLAEC RAKGVKLAQV LTAGFAEFSS DSADLERRML EQVADGAMRM
VGPNCIGTFS AASRMAVGAA RYNPTEGGGI TFFSQSGTFA GDVVRRAQVW GLPLGRALSC
GNCSDVDMVD LLLQAEQDPE TEIIAFYMES LRDPGLFFRA AAAMAKPVVI LRGAQTEQGQ
VAASSHTAAM ATDGLLWDAA LAQSGVIQVS NVDDLMDTLL ALAAHGRGPG ERLAIFGSGG
GVSVTASDAA ARAGLVVPAL DPATEEGLRR FGIPGTSVAN PIDIPVWGLR DGDRYIFEEI
INLLKDSPVI DRLVVFVEMG WVLDFMESDE AGLVALERIC DSIARARPDG AAMSLALRSS
GDKYQDDFVR DQRRKFLKRG ISVYQSTSRA VRAQARLIHG MRVLN