Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4994 |
Symbol | |
ID | 4583555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 505308 |
End bp | 506510 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772297 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_918750 |
Protein GI | 119387716 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.539292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGT TTCGTCTCAG CGGGATGGCG GCATGCGCGC TGGCGGCCTG CGCCGCGTTG CCGGCAGGCC CGGCGGCGGC CGAGGTTGCC ATCGGCGTGT TCGTGCCCAC GACCGGGGTG CTGGCGCCCC TGGGCAACGA CATGCGCAAC GGCTTTCTGC TGGCCGCGAA GGGTGCCATC GTCAAGGGCG AGCCGGTCAG GCTGATCGTC GAGGATACCG GCGGCAATCC CGCCAACGGG TTGCGCAAGG CGCAGAAGCT GGTGCTGGAG GACAAGGTCT CGCTGCTGCT GGGCGGGGCG AGCAGCGCGG TCACGCTGGG CATCAACGCC CAGGCGCCGC GGCTGAACGT GCCCATCGTC ACCACCAACG CCCAGGCGGT GCCGATCACC GGCGAGCAAT GCAGCCGCTT CATGTTCCGC ACCGTGCCCC ATGACGGCAA TACCGCCAAG GCCAGCGCGG CGATGTTCGC CGAGCGTCCC GACATGATCG GACGGAAATG GTTCGTGGTC TATCACGACT ATGCCTATGG CCTGTCCAAC AAGGCGGAGT TTTCGCATAT ACCCGGCATC CAGATCGCCG GAGAGGCCGG CCGCCCGGTG GGCACGGCGG ACTGGTCCAG CGCCATCGCG CAGATCCAGG CCAGCGATGC CGACGGCATC TACCTGGCGC TGGCGGTGGG CGACGACCTG ACCGCCTTTG TCAACCAGGC GCGCGGCTAT GGGCTGGACT TTCCGATCAT GACCCCGGCG GGCATCCCCG ACACGATGCT GCAGGCGCTT GGCAAGAACG GCGTGGGCAT GATCGCCAAC GGGCTGACCG CCTCGTGGAT GCAGGAGGAT GAGAGCCCGC AGATCGCGGA GCTGGTCAAG GCCTATCACG AGGAATACGG CATCGTGCCG GGCTATCAGG CCATCCAGGC CTATGCGGGG ATGCAGTTCG TGCTGGCCGT GCTGGAGGCG GCGGACGAGA TCTCGACCGA TGCGATCATC AAGGCACTCG AAGACACTGT CGCCGAAACC GTGGTGGGTC CCATCGATAT CCGCGCCGAG GATCACCAGG GGATGCAAGG CACCTTCGTC GCCGAGGCGG TCGCCCTGGA CCCGCCGCGG CACGGCGCAT CCATCGGCTG GAAACCCGTC ACACGGATGA GCTGGGACCA GATCAACCTG CTTCCCGAGG AAACCGGGTG CAAGGGTTTC TGA
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Protein sequence | MGKFRLSGMA ACALAACAAL PAGPAAAEVA IGVFVPTTGV LAPLGNDMRN GFLLAAKGAI VKGEPVRLIV EDTGGNPANG LRKAQKLVLE DKVSLLLGGA SSAVTLGINA QAPRLNVPIV TTNAQAVPIT GEQCSRFMFR TVPHDGNTAK ASAAMFAERP DMIGRKWFVV YHDYAYGLSN KAEFSHIPGI QIAGEAGRPV GTADWSSAIA QIQASDADGI YLALAVGDDL TAFVNQARGY GLDFPIMTPA GIPDTMLQAL GKNGVGMIAN GLTASWMQED ESPQIAELVK AYHEEYGIVP GYQAIQAYAG MQFVLAVLEA ADEISTDAII KALEDTVAET VVGPIDIRAE DHQGMQGTFV AEAVALDPPR HGASIGWKPV TRMSWDQINL LPEETGCKGF
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