Gene Pden_4993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4993 
Symbol 
ID4583554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp504070 
End bp505269 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID639772296 
Productmajor facilitator transporter 
Protein accessionYP_918749 
Protein GI119387715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.691753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA AACCGCTATC CATCGGATTG ATCCTGTTCT GTCAGGTCTC GGCCATGACG 
CTGTGGTTCT CGGCCACGGC TGCGGCGACG GCGCTGGTGG CCGATGGTAC CCTGTCGGGC
CAGCAGGCGG GCCTGTTGAC CGGCGCGGTG CAGCTTGGCT TTGTCGCCGG GACCCTGCTC
AGCGCGCTGA CCGGCATGGC CGACCGCTTC GATCCCCGGC GGCTGTTCGC CGCCTCGGCC
ATAGGCGGGG CGGCGGCCAA TGCGCTTTTG CTGGTCACGG GCTTCGACGG CGCGGCGACC
GTGGCGCTGC GCTTTGTCAC CGGCATGACG CTGGCCGGGG TCTATCCCGT GGGCATGAAG
ATGGCCGCGG GCTGGACGCA GAAGGGCATG GGGCTGATGA TCGGCGTGCT GGTGGGTGCG
CTGACGCTGG GATCGTCGCT GCCGCACCTG TTCAACGCGG TGGTCGGGCT GGACTGGCGC
ACCACGATCG TCATCTCCAG CCTTTGCGCG GCCAGCGCGG CGGGTGCGAT CCTGTTCTCG
GGTCTCGGCC CGCATCTGCG CCGCGCCGCC CGCTTTCGCC TGTCCGAGGC CCGGCAGGCC
GTGTTGCGCA AGCCGGTGCT GCTGGCGAAT GCCGGATATC TTGGCCATAT GTGGGAGCTT
TACGCCATGT GGGCCTGGAT CGGCGTGTTC CTGGAATGGG CGCTGACGCA GGCGGCAAGC
CCGCTGGCCG CGAAATCGGG GCTCGTCACC TTCGCGGTGA TCGCGGTGGG TGCCATTGGC
TGCGTCGTGG CCGGGATGCT GGCCGACCGC TTCGGCCGCA CCACCGTCAC CATGGCGGCC
ATGGCGATCA GCGGCGCCTG CGCCCTGCTG ATCGGCCTGA CCCCGGCGCT GGGCGCCTTC
GCCGTCATTG CCGTCGCGCT GATCTGGGGC GTCAGCGTGA TCGCCGATTC GGCGCAGTTC
TCGGCCAGCG TCGCGGAACT GTCCGAGCCC GAACTGGTCG GCACCATGCT GACGCTTCAG
ACCTGCATGG GCTTTCTGCT GACCTTCCTC ATCATCCAGG CCATGCCGCT GATCGTCGCG
GCCAGCGGCT GGAGCCACGC CTTTGCCACG CTGGCCATCG GCCCCTGGCT GGGCGTGCTG
GCCATGTGGC GGCTGCGCCG GCTGCCCGAG GCCAAGCGCC TGGCCCATGG CCGGCGCTGA
 
Protein sequence
MAGKPLSIGL ILFCQVSAMT LWFSATAAAT ALVADGTLSG QQAGLLTGAV QLGFVAGTLL 
SALTGMADRF DPRRLFAASA IGGAAANALL LVTGFDGAAT VALRFVTGMT LAGVYPVGMK
MAAGWTQKGM GLMIGVLVGA LTLGSSLPHL FNAVVGLDWR TTIVISSLCA ASAAGAILFS
GLGPHLRRAA RFRLSEARQA VLRKPVLLAN AGYLGHMWEL YAMWAWIGVF LEWALTQAAS
PLAAKSGLVT FAVIAVGAIG CVVAGMLADR FGRTTVTMAA MAISGACALL IGLTPALGAF
AVIAVALIWG VSVIADSAQF SASVAELSEP ELVGTMLTLQ TCMGFLLTFL IIQAMPLIVA
ASGWSHAFAT LAIGPWLGVL AMWRLRRLPE AKRLAHGRR