| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4955 |
|---|
| Symbol | |
|---|
| ID | 4583516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 461312 |
|---|
| End bp | 462640 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639772258 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_918711 |
|---|
| Protein GI | 119387677 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.916041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.433563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCTC CCGTCCGTGC CGTGCCATCG GATGCGCAAC TGCCCGCCCG CGTCGATGTG
GCGATCGTCG GGGGCGGCAT CGCCGGCGCC TCGACCGCCT GGGAACTGGC ACGGGCCGGC
CTGCGGGTCG CGCTGCTGGA AAAGGGCCGG ATCGGGGCCG AGCAGTCCTG CCGCAACTGG
GGCTGGTGCC GCCAGCAGAA CCGCGACGAG CGCGAATTGC CGCTGGCGAT GCTGGCGCTG
CGGATGTGGG AAACCCTGTC GCATGATCTG GGCGGCGATA CCGGCTTTCG CCGCGCCGGG
CTGGTCTATG CCAGCAATGA CGAGGCCGAA CTGGCGCAAT GGGAGGAATG GGGCCGGATG
GCGCGCGGCT ATGGCGTCGA TACCCGGATG ATCTCGGGCG CCGAGGTTGC CGGGATGGTC
CCCGGCGCTG CGCCGCGCTG GCGGGGCGGG GTGCATTCGC CGACCGACGG CCGTGCCGAG
CCGGCGCTGG CCGCTCCGCT GATGGCCGAG GCCGCGCGGA GCCATGGCGC GACCGTTCAC
CAGTCCTGCG CGGTGCGCGA GATCGAGTTC TCGGCCGGCC GGGTCAGCGG CGTGCTGACC
GAGCGCGGGC GGATCGGCTG CGATGCAGTG CTGGTCGCAG GGGGCGCATG GGCCGGGATG
CTGCTGCGTC ACCATGGAGT GCCTTTCCTG CAAACCTCGA TCCAGTCCAC CTCGTTTGCG
ACCGGCCCGA TGCCCGAGAT CACGGCAGGC GGCTTTTCGG CGCAGGACAT CACCGTCCGG
CGCCGGCTGG ACGGCGGCTA TACGGTCGGC ACCTCGGGCT TCGGTCGGCT GCATGTCTCG
CCGCGCGGGA TCATGCAGAT GCGGCCGTTC TGGAAGACCT TCGTGAAGCG CCGCGCCAAG
CTCAGCTATG CCATCGGCAG CAGCTTCTTC ACCGGGCCGG ATTCGCTGCA ACGCTGGAAC
GCCGCCGGTC CCTCGCCCTT CGAGCGGGTC AGGATCCTCG ACCCGAGGCC CGAGCCGCGG
CTGCTGAAAC GCGGGCTGGC CGACCTGGCC AGGACCTTTC CTGCGCTTGC GGGCGCGCAG
GTGGCGCATT CATGGGGCGG CATGGTCGAT TGCACGCCCG ACGCCATCGC GGTGATCGGG
CCGGTTGCGT CGCGGCCTGG GCTGTTCGTC TCGGCCGGCC ATAGCGGGCA TGGGTTCGGC
ATCGGCCCCG CCGCGGGGCG GCTCGCCGCC GAGCTGATCC GCGGCGTGAC GCCTTCGGTC
GATCCCGCGC CGTTCCGGCA TGGGCGGATG ATCGACGGCA GCGACCTTGG CGAAATGGGG
ATGATGTGA
|
|---|
| Protein sequence | MTPPVRAVPS DAQLPARVDV AIVGGGIAGA STAWELARAG LRVALLEKGR IGAEQSCRNW
GWCRQQNRDE RELPLAMLAL RMWETLSHDL GGDTGFRRAG LVYASNDEAE LAQWEEWGRM
ARGYGVDTRM ISGAEVAGMV PGAAPRWRGG VHSPTDGRAE PALAAPLMAE AARSHGATVH
QSCAVREIEF SAGRVSGVLT ERGRIGCDAV LVAGGAWAGM LLRHHGVPFL QTSIQSTSFA
TGPMPEITAG GFSAQDITVR RRLDGGYTVG TSGFGRLHVS PRGIMQMRPF WKTFVKRRAK
LSYAIGSSFF TGPDSLQRWN AAGPSPFERV RILDPRPEPR LLKRGLADLA RTFPALAGAQ
VAHSWGGMVD CTPDAIAVIG PVASRPGLFV SAGHSGHGFG IGPAAGRLAA ELIRGVTPSV
DPAPFRHGRM IDGSDLGEMG MM
|
|---|
| |