Gene Pden_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4927 
Symbol 
ID4583488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp432970 
End bp433770 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID639772230 
Productextracellular solute-binding protein 
Protein accessionYP_918683 
Protein GI119387649 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC GCAACCTGAC GCTTGCCGCG CTGACCGCGG TCGGCCTGGC CGCGGCCCTG 
CCTGCCGGCG CGGATACGCT GAGCGATATC CGCGACCGCG GCACCATCAA TATCGGCGTC
GATATCGGCC AGGCGCCGTT CGGCATGGTG GACGGGTCGA TGAACCAGAC CGGCTCGGAC
GTGGACACCG CCCGCAAGCT GGCCGAGGAT CTGGGCGTCA AGCTGAACGT CGTCTCGGTC
GCTCCGGCGA ACCGCATCCC CTTCCTGCTG ACCGGCAAGG TGGATGTCGT CGTCGCCAGC
TTCTCGATCA CCGAAGAGCG CAAGAAACAG GTCGATTTCT CGAAACCCTA CGCGGTCAGC
GAAGTCGTCG TGGCGACCAC CGGCGGGCTG GAACTGTCCG GTCCGGCCGA TCTGGAAGGC
CGTCAGATCG CGGTTACCCG CGCATCCACC AACGACACGC TGATCACCGA TGCGATCGCC
GCAAACGACG TGAAGGCCAC CATCGTCCGC TACGACGACA ACGCCATGAC CACCAATGCC
GTGCTCAGCG GCCAGCACGA CGTCTATGTC GTGGCGCAAT CGCTGCTGGT GCCGATCAAC
GAGGCCAATC CGTCGCGCAA GATCGAGCCG CAATTCGTGC TGCGCACCTA TCCGCTGGCC
ATCGGCCTGC GCAAGAACGA GCCGGAACTG AAGGACTGGC TGGACAACTG GGTCGACGAG
AACCTCGCCA ACGGCAAGCT GAACGAGATC TACCAGACCT ATCACCTGTC GCCCCTGCCC
GACGTGATCC CCGAGGAATG A
 
Protein sequence
MTIRNLTLAA LTAVGLAAAL PAGADTLSDI RDRGTINIGV DIGQAPFGMV DGSMNQTGSD 
VDTARKLAED LGVKLNVVSV APANRIPFLL TGKVDVVVAS FSITEERKKQ VDFSKPYAVS
EVVVATTGGL ELSGPADLEG RQIAVTRAST NDTLITDAIA ANDVKATIVR YDDNAMTTNA
VLSGQHDVYV VAQSLLVPIN EANPSRKIEP QFVLRTYPLA IGLRKNEPEL KDWLDNWVDE
NLANGKLNEI YQTYHLSPLP DVIPEE