Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4927 |
Symbol | |
ID | 4583488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 432970 |
End bp | 433770 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639772230 |
Product | extracellular solute-binding protein |
Protein accession | YP_918683 |
Protein GI | 119387649 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC GCAACCTGAC GCTTGCCGCG CTGACCGCGG TCGGCCTGGC CGCGGCCCTG CCTGCCGGCG CGGATACGCT GAGCGATATC CGCGACCGCG GCACCATCAA TATCGGCGTC GATATCGGCC AGGCGCCGTT CGGCATGGTG GACGGGTCGA TGAACCAGAC CGGCTCGGAC GTGGACACCG CCCGCAAGCT GGCCGAGGAT CTGGGCGTCA AGCTGAACGT CGTCTCGGTC GCTCCGGCGA ACCGCATCCC CTTCCTGCTG ACCGGCAAGG TGGATGTCGT CGTCGCCAGC TTCTCGATCA CCGAAGAGCG CAAGAAACAG GTCGATTTCT CGAAACCCTA CGCGGTCAGC GAAGTCGTCG TGGCGACCAC CGGCGGGCTG GAACTGTCCG GTCCGGCCGA TCTGGAAGGC CGTCAGATCG CGGTTACCCG CGCATCCACC AACGACACGC TGATCACCGA TGCGATCGCC GCAAACGACG TGAAGGCCAC CATCGTCCGC TACGACGACA ACGCCATGAC CACCAATGCC GTGCTCAGCG GCCAGCACGA CGTCTATGTC GTGGCGCAAT CGCTGCTGGT GCCGATCAAC GAGGCCAATC CGTCGCGCAA GATCGAGCCG CAATTCGTGC TGCGCACCTA TCCGCTGGCC ATCGGCCTGC GCAAGAACGA GCCGGAACTG AAGGACTGGC TGGACAACTG GGTCGACGAG AACCTCGCCA ACGGCAAGCT GAACGAGATC TACCAGACCT ATCACCTGTC GCCCCTGCCC GACGTGATCC CCGAGGAATG A
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Protein sequence | MTIRNLTLAA LTAVGLAAAL PAGADTLSDI RDRGTINIGV DIGQAPFGMV DGSMNQTGSD VDTARKLAED LGVKLNVVSV APANRIPFLL TGKVDVVVAS FSITEERKKQ VDFSKPYAVS EVVVATTGGL ELSGPADLEG RQIAVTRAST NDTLITDAIA ANDVKATIVR YDDNAMTTNA VLSGQHDVYV VAQSLLVPIN EANPSRKIEP QFVLRTYPLA IGLRKNEPEL KDWLDNWVDE NLANGKLNEI YQTYHLSPLP DVIPEE
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