Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4923 |
Symbol | |
ID | 4583484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 429786 |
End bp | 430586 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639772226 |
Product | regulatory proteins, IclR |
Protein accession | YP_918679 |
Protein GI | 119387645 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.877822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGGG TAGAAATGGA CGCCGACAGC ACCAAACCGG GCACGCAATC TCTGTCGCGA GTATTCACAG TCCTGGAGGC GGTGAGATCC GGCTGTGCCG ATCTCGCCTC CATCGGCCGT CATGTGGGAA CCGGCAGAAG CACGACACAT CGCCTTGTAA GCTTTCTCGT GCAGCACAGC TACCTTCGTC ATATCGATGG AAGGGGCTAT GTCCTGGGTC CGGCGCTCAT CAGCCTGGGC AGTGCCGCAT TGGAGCAGAT GCCCCTGACC AGTTGCGCGC GTCCGCATAT CGAGCAGCTC GCCCACGAAA CCGGCGACTC TATCCACCTG AGCATCCGCG AGGGCGACAA CATCATCTAT GTGGACAAGA TCCCCGGGAC GAAGGGGCTT GAGATGCGGT CGCGCATCGG CCTGCAAAAA CCCATGGCGA CGACGGGGAC GGGAAAGGTC CAGCTCTTCG ATCTGCCCGA ACAGGAGTGG TTGCGGCTTT ACGAACTGGC GCGGGCGGAC GCCCTGGCGA ACGAGATGAC CCCCACGGGC TTTCTGGAGT GGGACGTCTT CAGAGCGAAG CTGGCCGAGT TCCGGGACAA GGGCTTCGCG ATCGAGCGCG AGGAAAACGA AGTCGGGATC TGCTGTGTGG CGGCGCCGAT CCGCGATGCC AGGGGAAAGG TCGTGGCCGG CGTCAGCGTC GCAAGTTCCG TCCATTACAT GTCCGAGGAA CGGCTTGGGA CACTCGTCGC CCCTGTGATG CGCTGCGCCG AGGCGATTTC CGCGGAGCTT GGGTGGTGCA GGCCCGTCTG A
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Protein sequence | MDGVEMDADS TKPGTQSLSR VFTVLEAVRS GCADLASIGR HVGTGRSTTH RLVSFLVQHS YLRHIDGRGY VLGPALISLG SAALEQMPLT SCARPHIEQL AHETGDSIHL SIREGDNIIY VDKIPGTKGL EMRSRIGLQK PMATTGTGKV QLFDLPEQEW LRLYELARAD ALANEMTPTG FLEWDVFRAK LAEFRDKGFA IEREENEVGI CCVAAPIRDA RGKVVAGVSV ASSVHYMSEE RLGTLVAPVM RCAEAISAEL GWCRPV
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