Gene Pden_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4923 
Symbol 
ID4583484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp429786 
End bp430586 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID639772226 
Productregulatory proteins, IclR 
Protein accessionYP_918679 
Protein GI119387645 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.877822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGGG TAGAAATGGA CGCCGACAGC ACCAAACCGG GCACGCAATC TCTGTCGCGA 
GTATTCACAG TCCTGGAGGC GGTGAGATCC GGCTGTGCCG ATCTCGCCTC CATCGGCCGT
CATGTGGGAA CCGGCAGAAG CACGACACAT CGCCTTGTAA GCTTTCTCGT GCAGCACAGC
TACCTTCGTC ATATCGATGG AAGGGGCTAT GTCCTGGGTC CGGCGCTCAT CAGCCTGGGC
AGTGCCGCAT TGGAGCAGAT GCCCCTGACC AGTTGCGCGC GTCCGCATAT CGAGCAGCTC
GCCCACGAAA CCGGCGACTC TATCCACCTG AGCATCCGCG AGGGCGACAA CATCATCTAT
GTGGACAAGA TCCCCGGGAC GAAGGGGCTT GAGATGCGGT CGCGCATCGG CCTGCAAAAA
CCCATGGCGA CGACGGGGAC GGGAAAGGTC CAGCTCTTCG ATCTGCCCGA ACAGGAGTGG
TTGCGGCTTT ACGAACTGGC GCGGGCGGAC GCCCTGGCGA ACGAGATGAC CCCCACGGGC
TTTCTGGAGT GGGACGTCTT CAGAGCGAAG CTGGCCGAGT TCCGGGACAA GGGCTTCGCG
ATCGAGCGCG AGGAAAACGA AGTCGGGATC TGCTGTGTGG CGGCGCCGAT CCGCGATGCC
AGGGGAAAGG TCGTGGCCGG CGTCAGCGTC GCAAGTTCCG TCCATTACAT GTCCGAGGAA
CGGCTTGGGA CACTCGTCGC CCCTGTGATG CGCTGCGCCG AGGCGATTTC CGCGGAGCTT
GGGTGGTGCA GGCCCGTCTG A
 
Protein sequence
MDGVEMDADS TKPGTQSLSR VFTVLEAVRS GCADLASIGR HVGTGRSTTH RLVSFLVQHS 
YLRHIDGRGY VLGPALISLG SAALEQMPLT SCARPHIEQL AHETGDSIHL SIREGDNIIY
VDKIPGTKGL EMRSRIGLQK PMATTGTGKV QLFDLPEQEW LRLYELARAD ALANEMTPTG
FLEWDVFRAK LAEFRDKGFA IEREENEVGI CCVAAPIRDA RGKVVAGVSV ASSVHYMSEE
RLGTLVAPVM RCAEAISAEL GWCRPV