| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4903 |
|---|
| Symbol | |
|---|
| ID | 4583464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 406910 |
|---|
| End bp | 407698 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639772206 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_918659 |
|---|
| Protein GI | 119387625 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.766345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGG GGCTTGCGTT GGCCTGGCTG GTGCTGGCCG TGGTCCTTGC ATGGGCGCTG
GCGCCGGGGC TGTTCACGGG GTTCAGCGGC GTGACCGGCG TGCCGGGCAA CCAACTCAAG
GCTCCCGGCG GGGTCCATTG GCTTGGCACC GACGAGATCG GCCGCGACGT GCTGGCCCGC
ATCATCCACG GCGCGCGCTA TTCGCTGTCG GGCGCCTTCA TCGCGGTCGG GACCGGCCTT
GTCTTCGGCA CGCTGATCGG CGTTTCGGCG GGATCGGTCG GTGGGCGCAC CGACGCCGTG
CTCATGCGCG TCGTGGACAT CATGCTTGCC ATCCCAAGCC TGCTGCTGGC GCTGTCCTTC
ATCATCATTC TGGGCTTCGG TCATGTGCAG GTCGCCCTTG CGGTGGGGAT CACCTCGATC
GCCAGTTTCG CGCGCCTTGT AAGATCCGAG GTCGTGACCG TGCGCCGCGC CGATTATGTC
GAGGCGGCGT TCGGTTCGGG CGGCCGCTTC TGGGCGGTGA TCTGGCGCCA TGTGCTGCCG
AATTCGCTGA CCATGGTGCT GGCCTATGCG GCGCTGCAAC TGGGTTGGGC GGTCCTGCAG
ATCTCGACGC TGGGGTTTCT CGGCTATGGC GCGCCGCCGC CGACGCCGGA ATGGGGCCTG
CTGATCGCCG AGGGGCGCAA CTACATGATG ACGGCCTGGT GGCTGACGGT CTTTCCCGGC
CTGGCGGTGA TCGCCACGGT GCTGGCCGCG AACCGCATCG GCCGGTCGGT CGAAAGGGCG
GTGCGATGA
|
|---|
| Protein sequence | MQPGLALAWL VLAVVLAWAL APGLFTGFSG VTGVPGNQLK APGGVHWLGT DEIGRDVLAR
IIHGARYSLS GAFIAVGTGL VFGTLIGVSA GSVGGRTDAV LMRVVDIMLA IPSLLLALSF
IIILGFGHVQ VALAVGITSI ASFARLVRSE VVTVRRADYV EAAFGSGGRF WAVIWRHVLP
NSLTMVLAYA ALQLGWAVLQ ISTLGFLGYG APPPTPEWGL LIAEGRNYMM TAWWLTVFPG
LAVIATVLAA NRIGRSVERA VR
|
|---|
| |