Gene Pden_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4901 
Symbol 
ID4583462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp405160 
End bp406185 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID639772204 
Productluciferase family protein 
Protein accessionYP_918657 
Protein GI119387623 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA GAATCAAGAA ACCGGGCTTT TTCACCCGTT TGCTGGACGA TGCCGGCCCG 
GCCGAGCGTT ACAGCCTGGT AACCGAACAG ATCCGCACGG CAGAGCGTTT CGGCTATCAT
ACCGCCTGGG TGGCGCAGCA TCATTTCCAT CGCGACGAAG GCGGCCTTCC CGCGCCGCTG
GTTTTCCTTG CCCATGTCGC GGCACGGACC AGCCGGATCC GGCTGGCGAT CGGGGTGGTG
ACCTTGCCGC TGGAACACCC GGTGCGGGTC GCCGAGGATG CGGTGGTGCT CGACCTTCTG
TCGGGTGGAC GGCTGGACCT GGGGCTGGGC ACCGGGGGCA CGCCGGAGTC CTACGCCGCC
TTCGGCCATG ACCATGCAGA CCGCGCGACG ATCTACGACG AATATATCGC GACCCTGCGC
AAGGCCCTGG CCGGAGCCGA TCTGGGCGGC GGCAACAGGC TCTATCCCGC TGCCGGAGAT
CTGGCGTCGC GCATCTGGCA GGCGACCTTC TCGGTTCCCG GCGGGGTCCG GGCGGGCAGG
GCGGGCGACG GGCTGCTGCT GTCGCGCACC CAGCCGCGCA GCAAGGACAA TCCGGCGGCG
GATCTGCATG AGCTGCAACT GCCGATCGTC GAGGCTTATC ATGCAGCCCT GCCCGCAGGG
GCCGCTCCGC GCATTCTGGC CTCGCGTTCG GTCTTCGTGG CCGACAGCCG GGCCGAGGCC
CGCCGGCTGG CCGAGATCGG CCTGCGCCGC GTGGCCGCGC ATTTTGCCGG CAGCGGGCAT
ATTCTGCGCG GCGATACGCT GGACGACCTG ATCCGCACGC CGGATTCCCA TGTCGGCACC
CCCGATGAGG TGGCCGAGTC CCTGGCCGCC GATCCGACAC TGGATCACGC GACGGAAGTT
GCGATCCAGG TCCATTCGAT CGATCCCCCG CATCCGCTGA TCCTGCGCTC GATCGAGCTT
TTTGCCACCC GCGTTGCGCC CGCCCCTGGC TGGGCGGATG CGCCCTGCCT GTCCGAACCC
GCCTGA
 
Protein sequence
MSARIKKPGF FTRLLDDAGP AERYSLVTEQ IRTAERFGYH TAWVAQHHFH RDEGGLPAPL 
VFLAHVAART SRIRLAIGVV TLPLEHPVRV AEDAVVLDLL SGGRLDLGLG TGGTPESYAA
FGHDHADRAT IYDEYIATLR KALAGADLGG GNRLYPAAGD LASRIWQATF SVPGGVRAGR
AGDGLLLSRT QPRSKDNPAA DLHELQLPIV EAYHAALPAG AAPRILASRS VFVADSRAEA
RRLAEIGLRR VAAHFAGSGH ILRGDTLDDL IRTPDSHVGT PDEVAESLAA DPTLDHATEV
AIQVHSIDPP HPLILRSIEL FATRVAPAPG WADAPCLSEP A