| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4846 |
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| Symbol | |
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| ID | 4583407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 345633 |
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| End bp | 346655 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639772149 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_918602 |
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| Protein GI | 119387568 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.149481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGC AGAAGATCAA GAACATGGAA GAGTTCTCGG CGGTCAGCGG CATCTCGCGG
CCGACGATCT CGAAATACTT CAACGACCCG TCCAGCGTCC GCCGCTCGAC CCGCGAGCGG
ATCGAAGAGG CCATCGCCCG CTACGGCTAC CGGCCGAACC TGTTCGCCAT CAACCAGAAC
CGCAAGTTCA CCAAGAACAT CGGCATCATC GTCCCGCATA TCGTCGATCC GTTCTATGCC
GAGATCGTCC GCCAGATCGA GACGCGCTGC ATCGAGGCGG GGTATTGGGC CATCGTCCTG
GGCTCGCACG GCGATGCCGA GCGCGAGCTG AGTGCTATCG AGATGCTGTA TTCCCTGCGC
ATCGCCGGCG CCATCATCGC GCCCTTGGGG GACACGTCGG TCTCGGATCG CATCCGGCGA
CTTGCCGCGG ACATCCCCAC AGTGATTTTC GACAACCATA TGAACGGGGA CGAGATTTTC
GTCGGCACCG ACAATTTCCA AAGCGTCGGG CTGATGGTCG ACTACCTGTG CCGCAGTGGT
GAGCCGCCCT GCTTCCTGGA CATGCCGGCC GTCAATACCA ACGCCCGTGA ACGCCGCGAA
GCCTATGTCC GCGCCATGGA GGAGCAGGGC TTCCAGCCGC ATGTGATCCC GGCCGAATCG
GCCGGCTGGG ATTTCGAGGA ACTGGGCTAC AATGCCGGGC TGCGGCTGCT GCCTGCGCAT
CAACTGCCGA CGAACACTGT GCTTTGCGCC AATGACCGCA TGGCGATCGG CCTGATCGCG
GCGGCGTTTG AAAAGGGGCT GCGGGTGGGG CGCGGCGCCG CCACGGCGCT GCGCGTGGCC
GGCCATGACG ACCATCCGAT GGCCCGCTTT ACCGCGCCGG CCCTGACCAC TGTTGCGCAA
GACTATGTTT CCATTGCGGA AAACAGCGTC TCCACGCTTT TCGGCATGAT CGAAAACGGG
GTTCGTCCCG CCAGCCCGCT GCGGCGGCTT GAAGGCAAGT TGATCCTGCG GGCATCGGCA
TAA
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| Protein sequence | MEEQKIKNME EFSAVSGISR PTISKYFNDP SSVRRSTRER IEEAIARYGY RPNLFAINQN
RKFTKNIGII VPHIVDPFYA EIVRQIETRC IEAGYWAIVL GSHGDAEREL SAIEMLYSLR
IAGAIIAPLG DTSVSDRIRR LAADIPTVIF DNHMNGDEIF VGTDNFQSVG LMVDYLCRSG
EPPCFLDMPA VNTNARERRE AYVRAMEEQG FQPHVIPAES AGWDFEELGY NAGLRLLPAH
QLPTNTVLCA NDRMAIGLIA AAFEKGLRVG RGAATALRVA GHDDHPMARF TAPALTTVAQ
DYVSIAENSV STLFGMIENG VRPASPLRRL EGKLILRASA
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