Gene Pden_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4840 
Symbol 
ID4583401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp339581 
End bp340573 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID639772143 
Productalcohol dehydrogenase 
Protein accessionYP_918596 
Protein GI119387562 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA TCGTCCTTCG CCAGGGCGGC CAGGTAGCCG TCGAAACCCT GTCCGATCCC 
GAACCCGGTC CGGGCGAGGT GCTGATCGCG GTCCGCGCCA GCGGCATCTG CCACACCGAT
ATCGAGATCC TGCGGGGCAA TTACGGCGCC TCGGCCTTTC CGTTGGTGCC GGGCCACGAA
TATGCCGGCG AGGTGCTGGC CCTGGGCGCG GGTGTCACCG GCTTCGCTGC CGGCGATCTG
GTCGTGGTCG ATCCGAACAT CGGCTGCGGC ACCTGTCCCG GTTGCCGCGC CGGCCGGGTC
AACCTGTGCG AAAGCCTTGG CGCCTATGGC GTCACCCGCA ACGGCGGCTT TGCCGAGCGT
TGCGTGGTGC GGGCCGATGC CCTGGTGCCT GCGCCCGGCA TGGACCCGGC GCTGGCGGCG
TTGGCCGAGC CGATGGGTTG TGTGCTGAAC GGCCTGTCGC CCCTGGCCGG ACGCCGGATC
GACCGGGCGC TGGTCTTTGG CGCCGGACCC ATCGGCATGC TGATGGGCAT CGCCCTGCGT
CAGCGCGGGG CCGAGGCGAT CATGGTCGAT CTGGACGAGG ATCGGCTGGC GATGGCCGCC
GAGTTCGGCC TTGGCGCTTT GGCCCAGGGC ACGGCCGAGC TGGAGCGGTT GCGCCATGGC
TGCGATCTGG CGGTGGACGC GACCGGCGTG CCCGCGGTGG CGGCGCGCCT GCCGGAATAC
GCCGCGAATG GCGGCAATAT GCTTTATTTC GGCGTATGCC CGCCCGCGGC GCGGATCGAG
ATTTCCCCCT TCGAGATCTT CCGCCGCCAG CTTTCGCTGT TCGGCACGCA TTCCCTGAAC
CACAACATCG CCGAGGCGCT GGAGGTCATC CAGGCTTGCG GCCCGGGCCT GGGCAGGCTG
ATCACCCACC GGCTGCCGCT GCCCGAGGTC GCCAGGCTCT TCGGCGCCGG CACGCCGCGG
GGCGCCATGA AGGTGTTGAT GGATACGGAA TGA
 
Protein sequence
MQAIVLRQGG QVAVETLSDP EPGPGEVLIA VRASGICHTD IEILRGNYGA SAFPLVPGHE 
YAGEVLALGA GVTGFAAGDL VVVDPNIGCG TCPGCRAGRV NLCESLGAYG VTRNGGFAER
CVVRADALVP APGMDPALAA LAEPMGCVLN GLSPLAGRRI DRALVFGAGP IGMLMGIALR
QRGAEAIMVD LDEDRLAMAA EFGLGALAQG TAELERLRHG CDLAVDATGV PAVAARLPEY
AANGGNMLYF GVCPPAARIE ISPFEIFRRQ LSLFGTHSLN HNIAEALEVI QACGPGLGRL
ITHRLPLPEV ARLFGAGTPR GAMKVLMDTE