Gene Pden_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4829 
Symbol 
ID4583391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp329242 
End bp330195 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID639772133 
Productperiplasmic binding protein 
Protein accessionYP_918586 
Protein GI119387552 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCC TGACGCTTTC CCTTGCCTTC ACCGTCCCGC TTCTGGCCGT GCAACCTGCG 
ACGGGGGGCG AGTTTCCGGT CGCCGTGACC AGCTGCGGCC GCGAGATCGC CTTTGACGCA
GCGCCCGCCC GCGCCGTCGC CCATGGCTCG AACCTTGTCG AGATCATGCT GGCGCTGGGG
CTCGAGGATC GGATGCTGGG CTATAGCGGC CGGATCGAGC GGGTTCGGGC GGCGACCGAC
CTGTTCCCCG CCGCCGCCAA GCTGCGTCCC CTTCAGCGCG ACTATCCGAC GCTGGAGATG
CTGCTGGAGG AGGGCGCCGA TTTCTATTTC GCGGGTTGGA GCTACGGGAT GCGCGTCGGC
GGAGAGGTCA CGCCCGACAC GCTCGGCCGC TATGGCATCC CGGTCTACGA GCTGTCGGAA
TCCTGCATCC GCCTGGGACA GAAGAATCGG CCCGGCTTCG ACTATCTGTT CCGTGACCTG
GAAAACCTGG CGGCGATATT CGGCGTTCCC GAACGGGCCG AGGCACTGAT CGCGGATTAT
CGCGTGCGGC TGGACCGCGT GCGGGCAAGG CTTGCCGGCA AGACGGACCG CCCGCGCGTC
TTCGTCTACG ATTCCGGCGA CAAGGTGCCC CTCACGGCCG GCGGCTATGC CATGCCCCAG
GCCATCATCG ACGCAGCCGG CGGCCGCAAC ATCGCCGAGG ATATCGAAAG CAACTGGGTG
CGCATCGACT GGGAAACCGT GGCCGAGCGC AATCCCCAGG CCGTGGTGAT CGTCGATTAC
GGCGAGGTCG CGGCCGCGGA AAAGATCGCC TTCATGAAGG AACATCCCGC CTTCGCCCAT
ATCGATGCGG TGCGCGGCGA CCGCTTTCTG GTGCTGGGCT ATGACGACCT GACCCCCGGC
CCCCGCAATA TCCACGCGGT CGAGCGGCTG GCCGATTTCC TGCACGGCGA ATAG
 
Protein sequence
MHRLTLSLAF TVPLLAVQPA TGGEFPVAVT SCGREIAFDA APARAVAHGS NLVEIMLALG 
LEDRMLGYSG RIERVRAATD LFPAAAKLRP LQRDYPTLEM LLEEGADFYF AGWSYGMRVG
GEVTPDTLGR YGIPVYELSE SCIRLGQKNR PGFDYLFRDL ENLAAIFGVP ERAEALIADY
RVRLDRVRAR LAGKTDRPRV FVYDSGDKVP LTAGGYAMPQ AIIDAAGGRN IAEDIESNWV
RIDWETVAER NPQAVVIVDY GEVAAAEKIA FMKEHPAFAH IDAVRGDRFL VLGYDDLTPG
PRNIHAVERL ADFLHGE