| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4828 |
|---|
| Symbol | |
|---|
| ID | 4583390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 328455 |
|---|
| End bp | 329231 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639772132 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_918585 |
|---|
| Protein GI | 119387551 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.169592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTGG ACCTGAAGGT GCGGGACCTC TGCTGGGGTC CCGATCCGGG CCGGCGGATC
ATCGAGGCGA TCAGCTTCGA CGTGTCCGCC GGCTCGACCA CGGTGATCGT CGGCGCGAAC
GGGGCGGGAA AGTCCACGCT GCTGCGCAGC ATCTATCGCC GCAACCGCCC GACCGCCGGC
CAGGTATGCG CGGGCGGGCG CGACATCTGG CAGATGCCTG CCCGCGATGT CTCGCGCCTG
ATCGCGGCGG TGCTGCAAGA GATCGCACCG GATTTCGCCT TTACGGTGCG CGAGGTGGTG
GCCATGGGAC GCATCCCGCA TCGCAGCGGC CCGTTTTCGC ACAGCATGGG CGACGATGCG
ATCATCGATC AGGCTCTGGC CGATTTCGAG CTGGCGGATC TCGCCGACCG GCCGTTCAGC
GGCCTGTCGG GCGGTGAAAA GCAGCGCGCC CTGCTGGCCC GCGCCATCGT CCAGCAGCCG
CGGCTGATCG TCCTGGACGA GCCGACCAAC CACTTGGATA TCCGCCACCA GCTTGAAATC
ATCGACATGC TGCGCCGCCT GGACATGACC GTTCTGGTCA CGCTGCACGA CCTGAACCTT
GCGGCGGCAC TGGCCGACCA GGTGCTGGTG ATGCGCGCCG GCCGCATCTG CGCGCTTGGT
CCGCCGCTGG CGGTGCTGAC GCCCGATACC ATTCGCGCGG CCTTCGATGT CGAGGCCGAC
ATGGACCGCC ATCCCCGCAC CGGCCGGCCC CGCTTTTCCT TCGATCTGCC GTCCTGA
|
|---|
| Protein sequence | MAVDLKVRDL CWGPDPGRRI IEAISFDVSA GSTTVIVGAN GAGKSTLLRS IYRRNRPTAG
QVCAGGRDIW QMPARDVSRL IAAVLQEIAP DFAFTVREVV AMGRIPHRSG PFSHSMGDDA
IIDQALADFE LADLADRPFS GLSGGEKQRA LLARAIVQQP RLIVLDEPTN HLDIRHQLEI
IDMLRRLDMT VLVTLHDLNL AAALADQVLV MRAGRICALG PPLAVLTPDT IRAAFDVEAD
MDRHPRTGRP RFSFDLPS
|
|---|
| |