Gene Pden_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4818 
Symbol 
ID4583380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp315156 
End bp315995 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content75% 
IMG OID639772122 
Productregulatory proteins, IclR 
Protein accessionYP_918575 
Protein GI119387541 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.189718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.313773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CGCCGGCCCC CGCACCCGCC GAACCCGCCC TTGCCGAACC GGCCAGCGGC 
GGCGCGCAGG CGGTTGCGCG GGCGCTGTCA CTGCTGTCGC TGGTCGGCAG GGGCGGCGGC
GAGGGGCTGG CACTGGGACA ACTGGCCGCC GCATCGGGGC TGACAAGGCC CACGGTGCGG
CGGCTGCTGC TGGCCCTGGC CGCGGCGCGC ATGGTCGAGC AGGACCGCCG CACCCGGCGC
TATCACCTGG GCCCCGAGGC TTATCTGCTG GGCACATTCG CCGCCGAGCG CCACGGCATC
CTGCACCACG CACGCGAATC CATGCTGCGG CTGGCGCGCG AGACCGGCGA CGCCCTGCTG
CTGACCGTGC CGCAGGGCGA CCATACGCTG TGCCTGGAGC GGATCGAGGG CGATTTTCCG
ATCCGCACCC ATGCGCTGAT GCGCGGCGAC CGCAAGCCTG CGGGCGTCGG CGCCGGTGCC
CTGGCGATCC TTGCCGCCCT GCCCGCGCCC GAGGCCGATG CCCTGCTGCG GCAGACGGCG
CCGCAGGCCG AGGCGCTGGC CCCCGGCCTT GCCCCGGCAC TGGCCGAGGA TCTGGCGCAC
GCACGCGCGG CCGGTCATGC GCTGAACCCC GGCCGGGTGG TGCCGGGTTC CTGGGGCCTG
GGCGTCGCGA TCCTGTGGCC CGACGGCCGG CCGGCAGGCG CGCTGTCCAT CGCCGCCATC
GAGAACCGCA TGGGCGAGGC GAGGCGCGCC GAACTGGCCG TCCTGCTGCA CCGCGAGGCG
CAGCTGGTCG CGACCCGCCT TGCCGCACTT GAGACGCAAC CGAAAAGGAA CATCGCATGA
 
Protein sequence
MTETPAPAPA EPALAEPASG GAQAVARALS LLSLVGRGGG EGLALGQLAA ASGLTRPTVR 
RLLLALAAAR MVEQDRRTRR YHLGPEAYLL GTFAAERHGI LHHARESMLR LARETGDALL
LTVPQGDHTL CLERIEGDFP IRTHALMRGD RKPAGVGAGA LAILAALPAP EADALLRQTA
PQAEALAPGL APALAEDLAH ARAAGHALNP GRVVPGSWGL GVAILWPDGR PAGALSIAAI
ENRMGEARRA ELAVLLHREA QLVATRLAAL ETQPKRNIA