Gene Pden_4732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4732 
Symbol 
ID4583235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp219470 
End bp220072 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content66% 
IMG OID639772036 
Productmethylamine dehydrogenase accessory protein MauD 
Protein accessionYP_918489 
Protein GI119387455 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID[TIGR02661] methylamine dehydrogenase accessory protein MauD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0677851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCT TCCTGATCGC TTCCAACATC CTGTTGTGGC TGGCGTTCCT GGGCGTGACC 
GTGGTGATGC TGGGGCTGAT GCGCCAGGTC GGGCTGCTGC ACGAACGCTC GTCGCCCATG
GGCGCGATGA TCACCGATCA CGGCCCCGAT ATCGGCGATG CCGCGCCCGA GTTCGAGTTG
CCGGATTTCT TCGGCCGCCC GGTCCGCATC GGCGGGGCCG AGGCGCAGGG ACGCCAGACG
CTTCTGATGT TCACCGCGCC CAGCTGCCCG GTCTGCGACA AGCTGTTCCC GATCATCAAG
TCCATCGGCC GGGCCGAGGG CATCAACGTG GTGATGATCT CGGACGGCGC CCCCGAGGAG
CACCGTCGCT TCCTCGACAG CCACGAGCTG GGAGAGATGC GCTATGTCGT CTCGGCCGAG
GCGGGCATGG CCTTCCAGGT CGGCAAGATC CCCTACGGCG TGCTGCTGGA CGGCCAGGGC
ATCATCCGCG CCAAGGGCCT GACCAATACC CGCGAACACC TGGAAAGCCT GCTCGAGGCC
GATAAGACCG GCTTCGCCTC GTTGCAGCAA TACATGGCCA GCCGGAAGAA ACAGGCGGCC
TGA
 
Protein sequence
MTSFLIASNI LLWLAFLGVT VVMLGLMRQV GLLHERSSPM GAMITDHGPD IGDAAPEFEL 
PDFFGRPVRI GGAEAQGRQT LLMFTAPSCP VCDKLFPIIK SIGRAEGINV VMISDGAPEE
HRRFLDSHEL GEMRYVVSAE AGMAFQVGKI PYGVLLDGQG IIRAKGLTNT REHLESLLEA
DKTGFASLQQ YMASRKKQAA